RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 PLCB3Q01970 1234 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 SOX4Q06945 474 aaPredicted RBP19.52■□□□□ 0.72
DDX55-204ENST00000536079 SPAG1Q07617 926 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 GRIK3Q13003 919 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 ALCAMQ13740 583 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 POSTNQ15063 836 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 ENOX2Q16206 610 aaKnown RBP19.52■□□□□ 0.72
DDX55-204ENST00000536079 CSPP1Q1MSJ5 1256 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 CRELD2Q6UXH1 353 aaPredicted RBP19.52■□□□□ 0.72
DDX55-204ENST00000536079 APBB1IPQ7Z5R6 666 aaPredicted RBP19.52■□□□□ 0.72
DDX55-204ENST00000536079 RSPH1Q8WYR4 309 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 MRPL38Q96DV4 380 aaKnown RBP19.52■□□□□ 0.72
DDX55-204ENST00000536079 IGSF21Q96ID5 467 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 FAM193BQ96PV7 902 aaPredicted RBP19.52■□□□□ 0.72
DDX55-204ENST00000536079 PPP1R10Q96QC0 940 aaKnown RBP19.52■□□□□ 0.72
DDX55-204ENST00000536079 RPS6KC1Q96S38 1066 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 CBWD1Q9BRT8 395 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 EXOC1Q9NV70 894 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 PRG3Q9Y2Y8 225 aaPredicted RBP19.52■□□□□ 0.72
DDX55-204ENST00000536079 PLXNA4Q9HCM2 1894 aa19.52■□□□□ 0.71
DDX55-204ENST00000536079 PRRC2BQ5JSZ5 2229 aaKnown RBP19.51■□□□□ 0.71
DDX55-204ENST00000536079 CASTOR2A6NHX0 329 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 LACTBL1A8MY62 500 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 EIF3DO15371 548 aaKnown RBP eCLIP19.51■□□□□ 0.71
DDX55-204ENST00000536079 SLC34A2O95436 690 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 MYL1P05976 194 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 OR1G1P47890 313 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 ALDH7A1P49419 539 aaKnown RBP19.51■□□□□ 0.71
DDX55-204ENST00000536079 SYCP3Q8IZU3 236 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 MAFAQ8NHW3 353 aaPredicted RBP19.51■□□□□ 0.71
DDX55-204ENST00000536079 C18orf25Q96B23 403 aaPredicted RBP19.51■□□□□ 0.71
DDX55-204ENST00000536079 SAAL1Q96ER3 474 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 TMEM175Q9BSA9 504 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 PCIF1Q9H4Z3 704 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 GOLGA2P5Q9HBQ8 144 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 CNTN3Q9P232 1028 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 CPSF3Q9UKF6 684 aaKnown RBP19.51■□□□□ 0.71
DDX55-204ENST00000536079 AGO2Q9UKV8 859 aaKnown RBP19.51■□□□□ 0.71
DDX55-204ENST00000536079 EXOC7Q9UPT5 735 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 FAN1Q9Y2M0 1017 aa19.51■□□□□ 0.71
DDX55-204ENST00000536079 TTC26A0AVF1 554 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 GOLGA8IPA6NC78 632 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 GOLGA8JA6NMD2 632 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 ALDH2P05091 517 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 THP07101 528 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 CLTAP09496 248 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 KCNE1P15382 129 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 YARSP54577 528 aaKnown RBP19.5■□□□□ 0.71
DDX55-204ENST00000536079 UBE2HP62256 183 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 BMT2Q1RMZ1 405 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 SLFN12LQ6IEE8 588 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 TAS1R1Q7RTX1 841 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 ADGRD2Q7Z7M1 963 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 POMGNT1Q8WZA1 660 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 TIGD1Q96MW7 591 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 TMEM206Q9H813 350 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 PRDM6Q9NQX0 595 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 ATG2AQ2TAZ0 1938 aa19.5■□□□□ 0.71
DDX55-204ENST00000536079 FSCN2O14926 492 aa19.49■□□□□ 0.71
DDX55-204ENST00000536079 RHOBTB3O94955 611 aa19.49■□□□□ 0.71
DDX55-204ENST00000536079 EFEMP2O95967 443 aa19.49■□□□□ 0.71
DDX55-204ENST00000536079 ADRB2P07550 413 aa19.49■□□□□ 0.71
DDX55-204ENST00000536079 GTF2F1P35269 517 aaKnown RBP eCLIP19.49■□□□□ 0.71
DDX55-204ENST00000536079 TUSC3Q13454 348 aa19.49■□□□□ 0.71
DDX55-204ENST00000536079 CD300LGQ6UXG3 332 aa19.49■□□□□ 0.71
DDX55-204ENST00000536079 FAM213AQ9BRX8 229 aa19.49■□□□□ 0.71
DDX55-204ENST00000536079 LMAN2LQ9H0V9 348 aa19.49■□□□□ 0.71
DDX55-204ENST00000536079 LMCD1Q9NZU5 365 aa19.49■□□□□ 0.71
DDX55-204ENST00000536079 PCDHA5Q9Y5H7 936 aa19.49■□□□□ 0.71
DDX55-204ENST00000536079 CLIC2O15247 247 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 PPM1AP35813 382 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 GUCY2FP51841 1108 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 PSMD2Q13200 908 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 PTPROQ16827 1216 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 TCEAL5Q5H9L2 206 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 KANK3Q6NY19 840 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 SMYD4Q8IYR2 804 aaPredicted RBP19.48■□□□□ 0.71
DDX55-204ENST00000536079 HASPINQ8TF76 798 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 AUTS2Q8WXX7 1259 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 FAM84AQ96KN4 292 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 AGPAT3Q9NRZ7 376 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 TOPORSQ9NS56 1045 aaPredicted RBP19.48■□□□□ 0.71
DDX55-204ENST00000536079 LMBRD1Q9NUN5 540 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 TUBGCP4Q9UGJ1 667 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 MYO7AQ13402 2215 aa19.48■□□□□ 0.71
DDX55-204ENST00000536079 KIF4AO95239 1232 aa19.47■□□□□ 0.71
DDX55-204ENST00000536079 GARTP22102 1010 aa19.47■□□□□ 0.71
DDX55-204ENST00000536079 CLCNKBP51801 687 aa19.47■□□□□ 0.71
DDX55-204ENST00000536079 KCNB1Q14721 858 aa19.47■□□□□ 0.71
DDX55-204ENST00000536079 ZBTB6Q15916 424 aa19.47■□□□□ 0.71
DDX55-204ENST00000536079 KNOP1Q1ED39 458 aaKnown RBP19.47■□□□□ 0.71
DDX55-204ENST00000536079 STXBP4Q6ZWJ1 553 aa19.47■□□□□ 0.71
DDX55-204ENST00000536079 DDX53Q86TM3 631 aaKnown RBP19.47■□□□□ 0.71
DDX55-204ENST00000536079 C3orf58Q8NDZ4 430 aa19.47■□□□□ 0.71
DDX55-204ENST00000536079 SPATA20Q8TB22 786 aa19.47■□□□□ 0.71
DDX55-204ENST00000536079 FAM212AQ96EL1 285 aa19.47■□□□□ 0.71
DDX55-204ENST00000536079 TMEM169Q96HH4 297 aa19.47■□□□□ 0.71
DDX55-204ENST00000536079 GPR62Q9BZJ7 368 aa19.47■□□□□ 0.71
DDX55-204ENST00000536079 KCTD10Q9H3F6 313 aa19.47■□□□□ 0.71
DDX55-204ENST00000536079 RPF1Q9H9Y2 349 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms