RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 MANFP55145 182 aaKnown RBP3.92□□□□□ -1.78
COPB1-205ENST00000526527 TAP1Q03518 808 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.92□□□□□ -1.78
COPB1-205ENST00000526527 ZBTB46Q86UZ6 589 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 OR14C36Q8NHC7 312 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 AUTS2Q8WXX7 1259 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 UIMC1Q96RL1 719 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 CPEB1Q9BZB8 566 aaKnown RBP3.92□□□□□ -1.78
COPB1-205ENST00000526527 OSBPL6Q9BZF3 934 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 KCNH6Q9H252 994 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 MKS1Q9NXB0 559 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 DDX56Q9NY93 547 aaKnown RBP3.92□□□□□ -1.78
COPB1-205ENST00000526527 SAP30BPQ9UHR5 308 aaKnown RBP3.92□□□□□ -1.78
COPB1-205ENST00000526527 EIF2B4Q9UI10 523 aaKnown RBP3.92□□□□□ -1.78
COPB1-205ENST00000526527 MYPNQ86TC9 1320 aa3.92□□□□□ -1.78
COPB1-205ENST00000526527 WIZO95785 1651 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 PCDH8O95206 1070 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 HSP90AA1P07900 732 aaKnown RBP3.91□□□□□ -1.78
COPB1-205ENST00000526527 PDGFRBP09619 1106 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 CT47B1P0C2W7 299 aaPredicted RBP3.91□□□□□ -1.78
COPB1-205ENST00000526527 GAAP10253 952 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 APOBEC3AP31941 199 aaPredicted RBP3.91□□□□□ -1.78
COPB1-205ENST00000526527 KRT85P78386 507 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 MRPS9P82933 396 aaKnown RBP3.91□□□□□ -1.78
COPB1-205ENST00000526527 MEF2AQ02078 507 aaPredicted RBP3.91□□□□□ -1.78
COPB1-205ENST00000526527 PPARAQ07869 468 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 CLUL1Q15846 466 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 LONRF3Q496Y0 759 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 FBXO42Q6P3S6 717 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 Q6YL49 198 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 PNMA8AQ86V59 439 aaPredicted RBP3.91□□□□□ -1.78
COPB1-205ENST00000526527 LILRA3Q8N6C8 439 aaPredicted RBP3.91□□□□□ -1.78
COPB1-205ENST00000526527 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.91□□□□□ -1.78
COPB1-205ENST00000526527 PIK3C3Q8NEB9 887 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 OR52N2Q8NGI0 321 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 COG1Q8WTW3 980 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 MYEOVQ96EZ4 313 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 SMAD5Q99717 465 aaKnown RBP3.91□□□□□ -1.78
COPB1-205ENST00000526527 LSM14BQ9BX40 385 aaKnown RBP3.91□□□□□ -1.78
COPB1-205ENST00000526527 EPC1Q9H2F5 836 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 PRDM13Q9H4Q3 707 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 CYP4F11Q9HBI6 524 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 TOPORSQ9NS56 1045 aaPredicted RBP3.91□□□□□ -1.78
COPB1-205ENST00000526527 DNAJC28Q9NX36 388 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 ANKFY1Q9P2R3 1169 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 TRHDEQ9UKU6 1024 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 PPP2R3BQ9Y5P8 575 aa3.91□□□□□ -1.78
COPB1-205ENST00000526527 COL11A2P13942 1736 aaPredicted RBP3.9□□□□□ -1.78
COPB1-205ENST00000526527 NRP1O14786 923 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 KATNA1O75449 491 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 ALDH1A2O94788 518 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 SNUPNO95149 360 aaKnown RBP3.9□□□□□ -1.79
COPB1-205ENST00000526527 U2AF1L5P0DN76 240 aaPredicted RBP3.9□□□□□ -1.79
COPB1-205ENST00000526527 MYBL2P10244 700 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 VCAM1P19320 739 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 POU3F3P20264 500 aaPredicted RBP3.9□□□□□ -1.79
COPB1-205ENST00000526527 CASRP41180 1078 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 SLC16A1P53985 500 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 EPHB1P54762 984 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 SCAND1P57086 179 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 U2AF1Q01081 240 aaKnown RBP eCLIP3.9□□□□□ -1.79
COPB1-205ENST00000526527 MTMR1Q13613 665 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 VPS72Q15906 364 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 ANO4Q32M45 955 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 ODR4Q5SWX8 454 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 FAM43BQ6ZT52 329 aaPredicted RBP3.9□□□□□ -1.79
COPB1-205ENST00000526527 FAM83AQ86UY5 434 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 C9orf106Q8NAJ2 232 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 GLB1L3Q8NCI6 653 aaPredicted RBP3.9□□□□□ -1.79
COPB1-205ENST00000526527 OR5M3Q8NGP4 307 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 PPP1R14CQ8TAE6 165 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 GAB3Q8WWW8 586 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 CHMP4CQ96CF2 233 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 ZNF496Q96IT1 587 aaPredicted RBP3.9□□□□□ -1.79
COPB1-205ENST00000526527 PDCD2LQ9BRP1 358 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 NDC1Q9BTX1 674 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 SLC46A2Q9BY10 475 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 ANO3Q9BYT9 981 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 WDR11Q9BZH6 1224 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 SERHL2Q9H4I8 314 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 CCM2LQ9NUG4 571 aaPredicted RBP3.9□□□□□ -1.79
COPB1-205ENST00000526527 TRPM5Q9NZQ8 1165 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 TCEAL9Q9UHQ7 104 aa3.9□□□□□ -1.79
COPB1-205ENST00000526527 BAZ1BQ9UIG0 1483 aaKnown RBP3.9□□□□□ -1.79
COPB1-205ENST00000526527 SMARCA2P51531 1590 aa3.89□□□□□ -1.79
COPB1-205ENST00000526527 RSF1Q96T23 1441 aaPredicted RBP3.89□□□□□ -1.79
COPB1-205ENST00000526527 TRIM75PA6NK02 468 aa3.89□□□□□ -1.79
COPB1-205ENST00000526527 TMEM200CA6NKL6 621 aa3.89□□□□□ -1.79
COPB1-205ENST00000526527 XPOTO43592 962 aaKnown RBP3.89□□□□□ -1.79
COPB1-205ENST00000526527 SH3BP5O60239 455 aa3.89□□□□□ -1.79
COPB1-205ENST00000526527 DTNBO60941 627 aa3.89□□□□□ -1.79
COPB1-205ENST00000526527 EIF3JO75822 258 aaKnown RBP3.89□□□□□ -1.79
COPB1-205ENST00000526527 ZRANB2O95218 330 aaKnown RBP eCLIP3.89□□□□□ -1.79
COPB1-205ENST00000526527 PFKMP08237 780 aa3.89□□□□□ -1.79
COPB1-205ENST00000526527 NEK2P51955 445 aa3.89□□□□□ -1.79
COPB1-205ENST00000526527 ERVK-21P61565 698 aa3.89□□□□□ -1.79
COPB1-205ENST00000526527 CD69Q07108 199 aa3.89□□□□□ -1.79
COPB1-205ENST00000526527 MRPL49Q13405 166 aaKnown RBP3.89□□□□□ -1.79
COPB1-205ENST00000526527 PTPN21Q16825 1174 aa3.89□□□□□ -1.79
COPB1-205ENST00000526527 BRDTQ58F21 947 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms