RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 NLRP9Q7RTR0 991 aa12.79□□□□□ -0.36
SPIDR-217ENST00000522117 PEX5LQ8IYB4 626 aa12.79□□□□□ -0.36
SPIDR-217ENST00000522117 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.79□□□□□ -0.36
SPIDR-217ENST00000522117 ANKK1Q8NFD2 765 aa12.79□□□□□ -0.36
SPIDR-217ENST00000522117 PRPF31Q8WWY3 499 aaKnown RBP12.79□□□□□ -0.36
SPIDR-217ENST00000522117 GBA3Q9H227 469 aa12.79□□□□□ -0.36
SPIDR-217ENST00000522117 CYLDQ9NQC7 956 aa12.79□□□□□ -0.36
SPIDR-217ENST00000522117 KBTBD4Q9NVX7 518 aa12.79□□□□□ -0.36
SPIDR-217ENST00000522117 NKIRAS1Q9NYS0 192 aa12.79□□□□□ -0.36
SPIDR-217ENST00000522117 ZSWIM5Q9P217 1185 aa12.79□□□□□ -0.36
SPIDR-217ENST00000522117 CCPG1Q9ULG6 757 aa12.79□□□□□ -0.36
SPIDR-217ENST00000522117 PPP1R9AQ9ULJ8 1098 aa12.79□□□□□ -0.36
SPIDR-217ENST00000522117 NR2E3Q9Y5X4 410 aa12.79□□□□□ -0.36
SPIDR-217ENST00000522117 EP400Q96L91 3159 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 BTBD11A6QL63 1104 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 GYG2O15488 501 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 EDF1O60869 148 aaKnown RBP12.78□□□□□ -0.36
SPIDR-217ENST00000522117 USP1O94782 785 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 ZBED1O96006 694 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 FCER1AP12319 257 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 ATP5DP30049 168 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 PPIDQ08752 370 aaKnown RBP12.78□□□□□ -0.36
SPIDR-217ENST00000522117 MAPK7Q13164 816 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 TGFBIQ15582 683 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 NPY5RQ15761 445 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 DCAF12L1Q5VU92 463 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 ADAT2Q7Z6V5 191 aaKnown RBP12.78□□□□□ -0.36
SPIDR-217ENST00000522117 SFR1Q86XK3 245 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 PASD1Q8IV76 773 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 TMCO5AQ8N6Q1 288 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.78□□□□□ -0.36
SPIDR-217ENST00000522117 CCT7Q99832 543 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.78□□□□□ -0.36
SPIDR-217ENST00000522117 PRDM1O75626 825 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 ZWINTO95229 277 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 PARNO95453 639 aaKnown RBP12.78□□□□□ -0.36
SPIDR-217ENST00000522117 UQCRBP14927 111 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 FOSL1P15407 271 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 IL9RQ01113 521 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 MED21Q13503 144 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 MYLK3Q32MK0 819 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 SYCP2LQ5T4T6 812 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 C6orf183Q5T699 404 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 DEPDC1Q5TB30 811 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 AGAP9Q5VTM2 703 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 RFX8Q6ZV50 586 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 CROCCP3Q8IVE0 287 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 OR6Y1Q8NGX8 325 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 GIPC3Q8TF64 312 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 C7orf43Q8WVR3 580 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 TRPC7Q9HCX4 862 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 NDE1Q9NXR1 346 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 HOXC10Q9NYD6 342 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 SELENONQ9NZV5 590 aa12.78□□□□□ -0.36
SPIDR-217ENST00000522117 MTRF1LQ9UGC7 380 aaKnown RBP12.78□□□□□ -0.36
SPIDR-217ENST00000522117 CCDC162PA2VCL2 907 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 GAS8O95995 478 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 S100A1P23297 94 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 ARID5AQ03989 594 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 PDIA6Q15084 440 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 TMEM266Q2M3C6 531 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 SFT2D3Q587I9 215 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 PPP1R21Q6ZMI0 780 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 SCYL3Q8IZE3 742 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 SLC7A5P1Q8MH63 180 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 ARHGAP24Q8N264 748 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 TTLL11Q8NHH1 800 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 SREK1Q8WXA9 508 aaKnown RBP12.77□□□□□ -0.36
SPIDR-217ENST00000522117 MCUR1Q96AQ8 359 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 VPS50Q96JG6 964 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 ZMAT2Q96NC0 199 aaKnown RBP12.77□□□□□ -0.36
SPIDR-217ENST00000522117 MYD88Q99836 296 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 DRC3Q9H069 523 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 KANSL3Q9P2N6 904 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 TRAF3IP3Q9Y228 551 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 TRIM17Q9Y577 477 aa12.77□□□□□ -0.36
SPIDR-217ENST00000522117 CCDC160A6NGH7 325 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 F8W8V4 182 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 C2CD2LO14523 706 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 TRMUO75648 421 aaKnown RBP12.77□□□□□ -0.37
SPIDR-217ENST00000522117 LONP1P36776 959 aaKnown RBP12.77□□□□□ -0.37
SPIDR-217ENST00000522117 TMED10P49755 219 aaKnown RBP12.77□□□□□ -0.37
SPIDR-217ENST00000522117 RAP1GDS1P52306 607 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 CHN2P52757 468 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 PDE4DQ08499 809 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 PPP2R5BQ15173 497 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 KCTD21Q4G0X4 260 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 RGS9BPQ6ZS82 235 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 VPS52Q8N1B4 723 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 U2AF1L4Q8WU68 220 aaKnown RBP12.77□□□□□ -0.37
SPIDR-217ENST00000522117 ITPKCQ96DU7 683 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 VMP1Q96GC9 406 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 RUNDC3BQ96NL0 473 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 PSTPIP2Q9H939 334 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 ATAD3AQ9NVI7 634 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 TAS2R1Q9NYW7 299 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 ASAP1Q9ULH1 1129 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 PPM1HQ9ULR3 514 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 DOLKQ9UPQ8 538 aa12.77□□□□□ -0.37
SPIDR-217ENST00000522117 DMTF1Q9Y222 760 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms