RNA–Protein interactions for RNA: ENST00000516161.1

RNU1-41P-201, Transcript of RNA, U1 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU1-41P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-41P-201ENST00000516161 HOXD12P35452 270 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 P2RY2P41231 377 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 VIPR2P41587 438 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 RARSP54136 660 aaKnown RBP2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 CLDN6P56747 220 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 SEMG2Q02383 582 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 CALD1Q05682 793 aaKnown RBP2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 VAC14Q08AM6 782 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 SCRN1Q12765 414 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 KARSQ15046 597 aaKnown RBP2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 PGM5Q15124 567 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 PON2Q15165 354 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 ELF2Q15723 593 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 MAPK6Q16659 721 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 TBC1D25Q3MII6 688 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 ARL13BQ3SXY8 428 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 TNNI3KQ59H18 835 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 TSHZ3Q63HK5 1081 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 KCNV1Q6PIU1 500 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 METTL7BQ6UX53 244 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 LRRC69Q6ZNQ3 347 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 CYFIP1Q7L576 1253 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 ZC3H18Q86VM9 953 aaKnown RBP2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 TMPRSS12Q86WS5 348 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 RALGPS2Q86X27 583 aaPredicted RBP2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 GSTCDQ8NEC7 633 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 SPATA3Q8NHX4 192 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 C1orf216Q8TAB5 229 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 TRAPPC12Q8WVT3 735 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 PIGKQ92643 395 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 PHKBQ93100 1093 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 MIB2Q96AX9 1013 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 EAF2Q96CJ1 260 aaPredicted RBP2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 TCEAL4Q96EI5 215 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 MSANTD3Q96H12 275 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 B3GALT6Q96L58 329 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 INPP4AQ96PE3 977 aaPredicted RBP2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 HHIPQ96QV1 700 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 RMDN3Q96TC7 470 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 HERC2P3Q9BVR0 1158 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 EMILIN2Q9BXX0 1053 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 LRRC3Q9BY71 257 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 CRNKL1Q9BZJ0 848 aaKnown RBP2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 GPR62Q9BZJ7 368 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 C8orf33Q9H7E9 229 aaPredicted RBP2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 BRD9Q9H8M2 597 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 IL21RQ9HBE5 538 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 LRRC4CQ9HCJ2 640 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 MRPL17Q9NRX2 175 aaKnown RBP2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 SNTG2Q9NY99 539 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 GTSE1Q9NYZ3 720 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 PCDHB8Q9UN66 801 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 BTBD3Q9Y2F9 522 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 FPGT-TNNI3KV9GXZ4 949 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 HYDINQ4G0P3 5121 aa2.74□□□□□ -1.97
RNU1-41P-201ENST00000516161 IGKV6D-21A0A0A0MT36 114 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 PNMA6EA0A0J9YXQ4 647 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 A0A1W2PNU3 283 aaPredicted RBP2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 ANO9A1A5B4 782 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 SLC38A8A6NNN8 435 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 CHADO15335 359 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 HOXA2O43364 376 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 BRINP1O60477 761 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 NMT2O60551 498 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 ZC3H11AO75152 810 aaKnown RBP eCLIP2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 SEMA7AO75326 666 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 DXOO77932 396 aaKnown RBP2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 RPLP2P05387 115 aaKnown RBP2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 SSBP05455 408 aaKnown RBP eCLIP2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 ADH1AP07327 375 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 NDUFV2P19404 249 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 ATP4AP20648 1035 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 IGFBP6P24592 240 aaPredicted RBP2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 SLC1A4P43007 532 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 CRYBB1P53674 252 aaPredicted RBP2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 EPHA5P54756 1037 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 TMPRSS3P57727 454 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 KRT76Q01546 638 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 SRSF11Q05519 484 aaKnown RBP2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 DSC1Q08554 894 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 CCDC173Q0VFZ6 552 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 PPFIA1Q13136 1202 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 TARDBPQ13148 414 aaKnown RBP eCLIP2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 GRM4Q14833 912 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 NUMA1Q14980 2115 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 PLCB4Q15147 1175 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 DUOXA1Q1HG43 343 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 NAIF1Q69YI7 327 aaPredicted RBP2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 FBXL19Q6PCT2 694 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 C1orf228Q6PIY5 440 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 MTHFD1LQ6UB35 978 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 XKR5Q6UX68 686 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 CYP2U1Q7Z449 544 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 SLC41A1Q8IVJ1 513 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 COLGALT2Q8IYK4 626 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 MDGA1Q8NFP4 955 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 LNX1Q8TBB1 728 aaPredicted RBP2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 ING5Q8WYH8 240 aa2.73□□□□□ -1.97
RNU1-41P-201ENST00000516161 FAM20AQ96MK3 541 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms