RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 GBP2P32456 591 aaPredicted RBP21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 NPTX2P47972 431 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 CLCN5P51795 746 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 YARSP54577 528 aaKnown RBP21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 PEX3P56589 373 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 MCTP1Q6DN14 999 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 ASTLQ6HA08 431 aaPredicted RBP21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 DCLRE1AQ6PJP8 1040 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 PRSS55Q6UWB4 352 aaPredicted RBP21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 SPATA31D4Q6ZUB0 917 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 LNX1Q8TBB1 728 aaPredicted RBP21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 CCDC94Q9BW85 323 aaPredicted RBP21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 MRPL4Q9BYD3 311 aaKnown RBP21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 UPF2Q9HAU5 1272 aaKnown RBP21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 POLD4Q9HCU8 107 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 TOPORSQ9NS56 1045 aaPredicted RBP21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 USP20Q9Y2K6 914 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 PLXNA3P51805 1871 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 C2orf16Q68DN1 1984 aa21.94■■□□□ 1.1
UBE2D3-220ENST00000505307 HIP1RO75146 1068 aa21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 HNRNPA1P09651 372 aaKnown RBP eCLIP21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 RPL17P18621 184 aaKnown RBP21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 PSMD5Q16401 504 aa21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 RINT1Q6NUQ1 792 aa21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 CEP57Q86XR8 500 aa21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 GLYCTKQ8IVS8 523 aa21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 HASPINQ8TF76 798 aa21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 PPP1R10Q96QC0 940 aaKnown RBP21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 ACO2Q99798 780 aaKnown RBP21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 CLSTN3Q9BQT9 956 aa21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 SMOC2Q9H3U7 446 aa21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 KMT5AQ9NQR1 393 aa21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 ARHGAP28Q9P2N2 729 aa21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 CACNG4Q9UBN1 327 aa21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 FBXW11Q9UKB1 542 aa21.93■■□□□ 1.1
UBE2D3-220ENST00000505307 MTCL1Q9Y4B5 1905 aaKnown RBP21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 PP2D1A8MPX8 630 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 GALR2O43603 387 aaPredicted RBP21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 TRAPPC3O43617 180 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 N4BP1O75113 896 aaKnown RBP21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 GUCY2CP25092 1073 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 GRM5P41594 1212 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 MCM2P49736 904 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 ATP2C1P98194 919 aaPredicted RBP21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 IL17AQ16552 155 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 LIN9Q5TKA1 542 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 C1orf186Q6ZWK4 172 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 RTL10Q7L3V2 364 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 DAW1Q8N136 415 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 DDX27Q96GQ7 796 aaKnown RBP21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 TMX3Q96JJ7 454 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 PHOX2BQ99453 314 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 NTPCRQ9BSD7 190 aaKnown RBP21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 MMTAG2Q9BU76 263 aaKnown RBP21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 PTPRHQ9HD43 1115 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 SLC38A7Q9NVC3 462 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 ZFP37Q9Y6Q3 630 aaPredicted RBP21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 CACNA1HO95180 2353 aa21.92■■□□□ 1.1
UBE2D3-220ENST00000505307 H3BQV1 296 aa21.91■■□□□ 1.1
UBE2D3-220ENST00000505307 B3GAT3O94766 335 aa21.91■■□□□ 1.1
UBE2D3-220ENST00000505307 MYBP10242 640 aa21.91■■□□□ 1.1
UBE2D3-220ENST00000505307 HOXA9P31269 272 aa21.91■■□□□ 1.1
UBE2D3-220ENST00000505307 ZNF568Q3ZCX4 644 aa21.91■■□□□ 1.1
UBE2D3-220ENST00000505307 HYIQ5T013 277 aa21.91■■□□□ 1.1
UBE2D3-220ENST00000505307 ARL6IP4Q66PJ3 421 aaKnown RBP21.91■■□□□ 1.1
UBE2D3-220ENST00000505307 RUSC1Q9BVN2 902 aa21.91■■□□□ 1.1
UBE2D3-220ENST00000505307 KCND2Q9NZV8 630 aa21.91■■□□□ 1.1
UBE2D3-220ENST00000505307 FBXL21Q9UKT6 434 aa21.91■■□□□ 1.1
UBE2D3-220ENST00000505307 SMIM28A0A1B0GU29 152 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 MCF2P10911 925 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 FGFR3P22607 806 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 CDC25AP30304 524 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 SMTNP53814 917 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 MAPK7Q13164 816 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 UVSSAQ2YD98 709 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 XKR4Q5GH76 650 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 SPIRE2Q8WWL2 714 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 MYADMQ96S97 322 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 CDT1Q9H211 546 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 CXCL16Q9H2A7 254 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 WNT16Q9UBV4 365 aa21.9■■□□□ 1.1
UBE2D3-220ENST00000505307 SLC26A4O43511 780 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 XYLBO75191 536 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 POU2F2P09086 479 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 LAMP2P13473 410 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 CLCNKBP51801 687 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 RAB33AQ14088 237 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 UPP1Q16831 310 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 GLRA4Q5JXX5 417 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 PPM1LQ5SGD2 360 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 ALKAL1Q6UXT8 129 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 TMEM105Q8N8V8 129 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 SYT2Q8N9I0 419 aaPredicted RBP21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 ATOH1Q92858 354 aaPredicted RBP21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 CDK5RAP3Q96JB5 506 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 ACAP3Q96P50 834 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 TCHPQ9BT92 498 aa21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 TARS2Q9BW92 718 aaKnown RBP21.89■■□□□ 1.09
UBE2D3-220ENST00000505307 MTRRQ9UBK8 725 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms