RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 EMC1Q8N766 993 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 CHMP6Q96FZ7 201 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 GMCL1Q96IK5 515 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 ZSWIM1Q9BR11 485 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 RASA4BC9J798 803 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 TBX3O15119 743 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 RASA4O43374 803 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 BRD2P25440 801 aaKnown RBP14.35□□□□□ -0.11
GPC1-209ENST00000495100 GNA15P30679 374 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 HIRAP54198 1017 aaPredicted RBP14.35□□□□□ -0.11
GPC1-209ENST00000495100 TRAF1Q13077 416 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 GPS1Q13098 491 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 Q3C1V9 767 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 KDM7AQ6ZMT4 941 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 CCDC63Q8NA47 563 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 ACTRT1Q8TDG2 376 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 SLC7A3Q8WY07 619 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 BSNDQ8WZ55 320 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 XPO6Q96QU8 1125 aaKnown RBP14.35□□□□□ -0.11
GPC1-209ENST00000495100 RBAKQ9NYW8 714 aaPredicted RBP14.35□□□□□ -0.11
GPC1-209ENST00000495100 FBXO40Q9UH90 709 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 TBX20Q9UMR3 447 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 TRIM33Q9UPN9 1127 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 L3MBTL1Q9Y468 752 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 EXOC1LA0A1B0GW35 172 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 FAM107AO95990 144 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 PSMC5P62195 406 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 MRPS9P82933 396 aaKnown RBP14.35□□□□□ -0.11
GPC1-209ENST00000495100 PRKCEQ02156 737 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 FAXCQ5TGI0 409 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 USP37Q86T82 979 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 SLC17A8Q8NDX2 589 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 EPS8L1Q8TE68 723 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 SCFD2Q8WU76 684 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 KIF9Q9HAQ2 790 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 OLFML3Q9NRN5 406 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 R3HDM2Q9Y2K5 976 aaKnown RBP14.35□□□□□ -0.11
GPC1-209ENST00000495100 USP54Q70EL1 1684 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 SLC16A3O15427 465 aaKnown RBP14.34□□□□□ -0.11
GPC1-209ENST00000495100 NLRP11P59045 1033 aaKnown RBP14.34□□□□□ -0.11
GPC1-209ENST00000495100 P3H1Q32P28 736 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 LIN9Q5TKA1 542 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 SLC13A5Q86YT5 568 aaPredicted RBP14.34□□□□□ -0.11
GPC1-209ENST00000495100 FAM151AQ8WW52 585 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 MCEEQ96PE7 176 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 CDC42EP4Q9H3Q1 356 aaKnown RBP14.34□□□□□ -0.11
GPC1-209ENST00000495100 SLITRK6Q9H5Y7 841 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 PCDHA10Q9Y5I2 948 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.34□□□□□ -0.11
GPC1-209ENST00000495100 RTN2O75298 545 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 UPP2O95045 317 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 CA4P22748 312 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 HSPA9P38646 679 aaKnown RBP14.34□□□□□ -0.11
GPC1-209ENST00000495100 TMEM62Q0P6H9 643 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 CIAPIN1Q6FI81 312 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 MCF2L2Q86YR7 1114 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 MICALL2Q8IY33 904 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 ZBED8Q8IZ13 594 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 C7orf31Q8N865 590 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 DEFB129Q9H1M3 183 aa14.34□□□□□ -0.11
GPC1-209ENST00000495100 HERC5Q9UII4 1024 aaKnown RBP14.34□□□□□ -0.11
GPC1-209ENST00000495100 CCNE2O96020 404 aa14.33□□□□□ -0.11
GPC1-209ENST00000495100 HLA-DRAP01903 254 aa14.33□□□□□ -0.11
GPC1-209ENST00000495100 VCAM1P19320 739 aa14.33□□□□□ -0.11
GPC1-209ENST00000495100 MAP2K2P36507 400 aa14.33□□□□□ -0.11
GPC1-209ENST00000495100 COILP38432 576 aaPredicted RBP14.33□□□□□ -0.11
GPC1-209ENST00000495100 RAP1GAPP47736 663 aa14.33□□□□□ -0.11
GPC1-209ENST00000495100 LACTBP83111 547 aaPredicted RBP14.33□□□□□ -0.11
GPC1-209ENST00000495100 OVGP1Q12889 678 aa14.33□□□□□ -0.11
GPC1-209ENST00000495100 KLHL29Q96CT2 875 aa14.33□□□□□ -0.11
GPC1-209ENST00000495100 FEM1BQ9UK73 627 aa14.33□□□□□ -0.11
GPC1-209ENST00000495100 SUGT1Q9Y2Z0 365 aa14.33□□□□□ -0.11
GPC1-209ENST00000495100 SYNGAP1Q96PV0 1343 aa14.33□□□□□ -0.11
GPC1-209ENST00000495100 LCA5LO95447 670 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 PGK2P07205 417 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 DNAJC3Q13217 504 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 IZUMO3Q5VZ72 239 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 RHPN2Q8IUC4 686 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 CCDC77Q9BR77 488 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 KLC4Q9NSK0 619 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 PIH1D1Q9NWS0 290 aaKnown RBP14.33□□□□□ -0.12
GPC1-209ENST00000495100 AGO2Q9UKV8 859 aaKnown RBP14.33□□□□□ -0.12
GPC1-209ENST00000495100 IKBKGQ9Y6K9 419 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 PHF2O75151 1096 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 ATP11AP98196 1134 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 GRM1Q13255 1194 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 SCARA3Q6AZY7 606 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 CCDC89Q8N998 374 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 PRCCQ92733 491 aaPredicted RBP14.33□□□□□ -0.12
GPC1-209ENST00000495100 IDI2Q9BXS1 227 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 SLC40A1Q9NP59 571 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 UBR2Q8IWV8 1755 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 UMODL1Q5DID0 1318 aa14.33□□□□□ -0.12
GPC1-209ENST00000495100 TMEM191BP0C7N4 346 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 RPL7AP62424 266 aaKnown RBP14.32□□□□□ -0.12
GPC1-209ENST00000495100 MDH1BQ5I0G3 518 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 HHATQ5VTY9 493 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 TATDN1Q6P1N9 297 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 TAOK1Q7L7X3 1001 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 C1orf131Q8NDD1 294 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms