RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ZNF579Q8NAF0 562 aaKnown RBP17.03■□□□□ 0.32
U2AF1-211ENST00000486519 ADAM32Q8TC27 787 aa17.03■□□□□ 0.32
U2AF1-211ENST00000486519 PIK3R5Q8WYR1 880 aa17.03■□□□□ 0.32
U2AF1-211ENST00000486519 RSPRY1Q96DX4 576 aa17.03■□□□□ 0.32
U2AF1-211ENST00000486519 LOXL4Q96JB6 756 aa17.03■□□□□ 0.32
U2AF1-211ENST00000486519 CXCL16Q9H2A7 254 aa17.03■□□□□ 0.32
U2AF1-211ENST00000486519 NXF3Q9H4D5 531 aaKnown RBP17.03■□□□□ 0.32
U2AF1-211ENST00000486519 KLK14Q9P0G3 267 aa17.03■□□□□ 0.32
U2AF1-211ENST00000486519 SLC38A8A6NNN8 435 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 KIF4AO95239 1232 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 CALM1P0DP23 149 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 CALM2P0DP24 149 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 CALM3P0DP25 149 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 AKAP5P24588 427 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 CREMQ03060 361 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 FUT2Q10981 343 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 NFXL1Q6ZNB6 911 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 CACNA2D4Q7Z3S7 1137 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 ASB16Q96NS5 453 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 TTPALQ9BTX7 342 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 LRRC2Q9BYS8 371 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 ZFP14Q9HCL3 533 aa17.02■□□□□ 0.32
U2AF1-211ENST00000486519 U3KPZ7 1027 aaPredicted RBP17.02■□□□□ 0.32
U2AF1-211ENST00000486519 ARID2Q68CP9 1835 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 LNP1A1A4G5 178 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 PRC1O43663 620 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 MAFO75444 373 aaPredicted RBP17.01■□□□□ 0.31
U2AF1-211ENST00000486519 TADA2AO75478 443 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 SRGAP2CP0DJJ0 459 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 OR1D2P34982 312 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 CDC42EP1Q00587 391 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 DEFB124Q8NES8 71 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 TTC8Q8TAM2 541 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 IRF7Q92985 503 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 KIF12Q96FN5 646 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 VPS45Q9NRW7 570 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 BMP2KQ9NSY1 1161 aaPredicted RBP17.01■□□□□ 0.31
U2AF1-211ENST00000486519 COL4A3BPQ9Y5P4 624 aa17.01■□□□□ 0.31
U2AF1-211ENST00000486519 SF3B1O75533 1304 aaKnown RBP eCLIP17■□□□□ 0.316e-6■■■■■ 103.4
U2AF1-211ENST00000486519 WDR27A2RRH5 827 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 CASTOR2A6NHX0 329 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 MSH4O15457 936 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 TSPAN1O60635 241 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 MOSPD3O75425 235 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 GJA1P17302 382 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 HOXA6P31267 233 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 DNM2P50570 870 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 SETQ01105 290 aaPredicted RBP17■□□□□ 0.31
U2AF1-211ENST00000486519 RAB33AQ14088 237 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 HSP90AA2PQ14568 343 aaPredicted RBP17■□□□□ 0.31
U2AF1-211ENST00000486519 PPP1R18Q6NYC8 613 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 ANO5Q75V66 913 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 CDR2LQ86X02 465 aaPredicted RBP17■□□□□ 0.31
U2AF1-211ENST00000486519 MICU3Q86XE3 530 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 FANCBQ8NB91 859 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 TMEM143Q96AN5 459 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 TRPV5Q9NQA5 729 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 NEUROG3Q9Y4Z2 214 aa17■□□□□ 0.31
U2AF1-211ENST00000486519 ABCA7Q8IZY2 2146 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 CCDC69A6NI79 296 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 CDX4O14627 284 aaPredicted RBP16.99■□□□□ 0.31
U2AF1-211ENST00000486519 DCLK1O15075 740 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 PSMC3P17980 439 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 NPEPPSP55786 919 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 PLK5Q496M5 336 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 PROSER1Q86XN7 944 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 GPIHBP1Q8IV16 184 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 CORO1BQ9BR76 489 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 UBN1Q9NPG3 1134 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 MSRB2Q9Y3D2 182 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 PCDHGA5Q9Y5G8 931 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 PCNX2A6NKB5 2137 aa16.99■□□□□ 0.31
U2AF1-211ENST00000486519 CACNA1EQ15878 2313 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 DDX11L8A8MPP1 907 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 PATE3B3GLJ2 98 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 HIP1O00291 1037 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 NR1I2O75469 434 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 CCDC192P0DO97 292 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 CEACAM1P13688 526 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 LRRC32Q14392 662 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 PON2Q15165 354 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 XKR3Q5GH77 459 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 B4GALNT3Q6L9W6 998 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 SRGAP1Q7Z6B7 1085 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 HS6ST3Q8IZP7 471 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 PRPF31Q8WWY3 499 aaKnown RBP16.98■□□□□ 0.31
U2AF1-211ENST00000486519 DUSP15Q9H1R2 295 aaPredicted RBP16.98■□□□□ 0.31
U2AF1-211ENST00000486519 OSBPL3Q9H4L5 887 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 AVENQ9NQS1 362 aaPredicted RBP16.98■□□□□ 0.31
U2AF1-211ENST00000486519 BARHL2Q9NY43 387 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 SNTG2Q9NY99 539 aa16.98■□□□□ 0.31
U2AF1-211ENST00000486519 V9GY48 417 aaPredicted RBP16.98■□□□□ 0.31
U2AF1-211ENST00000486519 ZNF263O14978 683 aa16.97■□□□□ 0.31
U2AF1-211ENST00000486519 LAMTOR4Q0VGL1 99 aa16.97■□□□□ 0.31
U2AF1-211ENST00000486519 CCINQ13939 588 aa16.97■□□□□ 0.31
U2AF1-211ENST00000486519 UVSSAQ2YD98 709 aa16.97■□□□□ 0.31
U2AF1-211ENST00000486519 CNNM3Q8NE01 707 aa16.97■□□□□ 0.31
U2AF1-211ENST00000486519 ZC3H10Q96K80 434 aaKnown RBP16.97■□□□□ 0.31
U2AF1-211ENST00000486519 GIT1Q9Y2X7 761 aa16.97■□□□□ 0.31
U2AF1-211ENST00000486519 CDY1Q9Y6F8 540 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms