RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 MAPK7Q13164 816 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 ZRSR1Q15695 479 aaKnown RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 FAM171A1Q5VUB5 890 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 ARL6IP4Q66PJ3 421 aaKnown RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 DCLRE1AQ6PJP8 1040 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 TAS1R3Q7RTX0 852 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 ALYREFQ86V81 257 aaKnown RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 SYT2Q8N9I0 419 aaPredicted RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 PRSS33Q8NF86 280 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 LNX1Q8TBB1 728 aaPredicted RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 PIK3R5Q8WYR1 880 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 SMG7Q92540 1137 aaKnown RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 STAMQ92783 540 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 ZNF707Q96C28 371 aaPredicted RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 PNMA5Q96PV4 448 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 PPP1R10Q96QC0 940 aaKnown RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 CLSTN3Q9BQT9 956 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 NTPCRQ9BSD7 190 aaKnown RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 CCDC94Q9BW85 323 aaPredicted RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 MRPL4Q9BYD3 311 aaKnown RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 SMOC2Q9H3U7 446 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 PIDD1Q9HB75 910 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 PTPRHQ9HD43 1115 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 ZDHHC7Q9NXF8 308 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 ARHGAP28Q9P2N2 729 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 KCNG1Q9UIX4 513 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.36□□□□□ -0.75
NUP50-215ENST00000484186 ZNF318Q5VUA4 2279 aa10.36□□□□□ -0.75
NUP50-215ENST00000484186 SMIM28A0A1B0GU29 152 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 VWA3AA6NCI4 1184 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 TMEM189-UBE2V1I3L0A0 370 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 SLC16A4O15374 487 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 N4BP1O75113 896 aaKnown RBP10.35□□□□□ -0.75
NUP50-215ENST00000484186 GUCY2CP25092 1073 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 GBP2P32456 591 aaPredicted RBP10.35□□□□□ -0.75
NUP50-215ENST00000484186 GRM5P41594 1212 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 CLCNKBP51801 687 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 PTPN5P54829 565 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 VCPP55072 806 aaKnown RBP10.35□□□□□ -0.75
NUP50-215ENST00000484186 TDGQ13569 410 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 PSMD5Q16401 504 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 XKR4Q5GH76 650 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 GLRA4Q5JXX5 417 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 LARP1BQ659C4 914 aaKnown RBP10.35□□□□□ -0.75
NUP50-215ENST00000484186 PDXDC1Q6P996 788 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 ALKAL1Q6UXT8 129 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 CEP120Q8N960 986 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 SPIRE2Q8WWL2 714 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 CDK5RAP3Q96JB5 506 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 UROC1Q96N76 676 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 PLIN2Q99541 437 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 TCHPQ9BT92 498 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 TARS2Q9BW92 718 aaKnown RBP10.35□□□□□ -0.75
NUP50-215ENST00000484186 PRKD2Q9BZL6 878 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 CDT1Q9H211 546 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 KCNK12Q9HB15 430 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 TOPORSQ9NS56 1045 aaPredicted RBP10.35□□□□□ -0.75
NUP50-215ENST00000484186 IGSF9Q9P2J2 1179 aa10.35□□□□□ -0.75
NUP50-215ENST00000484186 CLUHO75153 1309 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 PLXNA3P51805 1871 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 ZMYND10O75800 440 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 B3GAT3O94766 335 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 PLA2G4BP0C869 781 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 MCF2P10911 925 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 PLS3P13797 630 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 FGFR3P22607 806 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 PROZP22891 400 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 IGFBP6P24592 240 aaPredicted RBP10.34□□□□□ -0.75
NUP50-215ENST00000484186 MRE11P49959 708 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 NUBP1P53384 320 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 SMTNP53814 917 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 SLC12A3P55017 1021 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 OSTNP61366 133 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 RAD51AP2Q09MP3 1159 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 TCF15Q12870 199 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 STRN3Q13033 797 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 UPP1Q16831 310 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 ZNF568Q3ZCX4 644 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 CD300LGQ6UXG3 332 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.34□□□□□ -0.75
NUP50-215ENST00000484186 ZBTB45Q96K62 511 aaPredicted RBP10.34□□□□□ -0.75
NUP50-215ENST00000484186 AK8Q96MA6 479 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 TBC1D32Q96NH3 1257 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 ACAP3Q96P50 834 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 MYADMQ96S97 322 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 GOLGA2P5Q9HBQ8 144 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 KCND2Q9NZV8 630 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 EPS15L1Q9UBC2 864 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 FBXW11Q9UKB1 542 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 TRIOO75962 3097 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 DENND4AQ7Z401 1863 aa10.34□□□□□ -0.75
NUP50-215ENST00000484186 ABLIM1O14639 778 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 SLC26A4O43511 780 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 TRAPPC3O43617 180 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 TOM1L1O75674 476 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 HNRNPA1P09651 372 aaKnown RBP eCLIP10.33□□□□□ -0.76
NUP50-215ENST00000484186 OR1D2P34982 312 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 RAB33AQ14088 237 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 TMEM119Q4V9L6 283 aa10.33□□□□□ -0.76
NUP50-215ENST00000484186 LIN9Q5TKA1 542 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms