RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 DOCK8Q8NF50 2099 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 COL4A3Q01955 1670 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 CCDC169A6NNP5 214 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 SFI1A8K8P3 1242 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 ZMYND10O75800 440 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 BRCC3P46736 316 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
VARS2-208ENST00000477052 CLCNKBP51801 687 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 PEX3P56589 373 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 SOX4Q06945 474 aaPredicted RBP12.84□□□□□ -0.35
VARS2-208ENST00000477052 RAD51AP2Q09MP3 1159 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 CD300LGQ6UXG3 332 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 FRMD5Q7Z6J6 570 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 DAW1Q8N136 415 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 GPR152Q8TDT2 470 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 IFT74Q96LB3 600 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 ADPGKQ9BRR6 497 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 PLEKHA4Q9H4M7 779 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.84□□□□□ -0.35
VARS2-208ENST00000477052 HCFC1R1Q9NWW0 138 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 IGSF9Q9P2J2 1179 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 EPS15L1Q9UBC2 864 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 NOL7Q9UMY1 257 aaKnown RBP12.84□□□□□ -0.35
VARS2-208ENST00000477052 TRIP11Q15643 1979 aa12.83□□□□□ -0.35
VARS2-208ENST00000477052 K7ERI5 159 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 HIP1RO75146 1068 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 B3GAT3O94766 335 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 C8AP07357 584 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 HARSP12081 509 aaKnown RBP12.83□□□□□ -0.36
VARS2-208ENST00000477052 LAMP2P13473 410 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 AOC1P19801 751 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 FSHRP23945 695 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 TKTP29401 623 aaKnown RBP12.83□□□□□ -0.36
VARS2-208ENST00000477052 OR1D2P34982 312 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 NPTX2P47972 431 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 CLCN5P51795 746 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 HMGN5P82970 282 aaKnown RBP12.83□□□□□ -0.36
VARS2-208ENST00000477052 PPP2R5AQ15172 486 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 SEZ6Q53EL9 994 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 HAUS3Q68CZ6 603 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 ELMSAN1Q6PJG2 1045 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 TAS1R3Q7RTX0 852 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 C3orf58Q8NDZ4 430 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 ITFG1Q8TB96 612 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 PIK3R5Q8WYR1 880 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 STAMQ92783 540 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 ZSCAN31Q96LW9 406 aaPredicted RBP12.83□□□□□ -0.36
VARS2-208ENST00000477052 PPP1R10Q96QC0 940 aaKnown RBP12.83□□□□□ -0.36
VARS2-208ENST00000477052 MMTAG2Q9BU76 263 aaKnown RBP12.83□□□□□ -0.36
VARS2-208ENST00000477052 TARS2Q9BW92 718 aaKnown RBP12.83□□□□□ -0.36
VARS2-208ENST00000477052 ZDHHC7Q9NXF8 308 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 DPP7Q9UHL4 492 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 FBXW11Q9UKB1 542 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 NUMBLQ9Y6R0 609 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 DMDP11532 3685 aa12.83□□□□□ -0.36
VARS2-208ENST00000477052 MEFVO15553 781 aaPredicted RBP12.82□□□□□ -0.36
VARS2-208ENST00000477052 U2AF2P26368 475 aaKnown RBP eCLIP12.82□□□□□ -0.36
VARS2-208ENST00000477052 ORC2Q13416 577 aaPredicted RBP12.82□□□□□ -0.36
VARS2-208ENST00000477052 HTR4Q13639 388 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 DCAF4L1Q3SXM0 396 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 ZNF568Q3ZCX4 644 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 C8orf34Q49A92 452 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 SPECC1Q5M775 1068 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 PPM1LQ5SGD2 360 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 PARM1Q6UWI2 310 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 IGSF22Q8N9C0 903 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 SLC7A14Q8TBB6 771 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 HDAC7Q8WUI4 952 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 ING5Q8WYH8 240 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 KIFAP3Q92845 792 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 FGF14Q92915 247 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 ZBTB45Q96K62 511 aaPredicted RBP12.82□□□□□ -0.36
VARS2-208ENST00000477052 ZMAT2Q96NC0 199 aaKnown RBP12.82□□□□□ -0.36
VARS2-208ENST00000477052 ACO2Q99798 780 aaKnown RBP12.82□□□□□ -0.36
VARS2-208ENST00000477052 CDT1Q9H211 546 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 CDY1Q9Y6F8 540 aa12.82□□□□□ -0.36
VARS2-208ENST00000477052 ZMYM2Q9UBW7 1377 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 CFAP54Q96N23 3096 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 NPHP3-ACAD11A0A0J9YXS1 232 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 SMIM28A0A1B0GU29 152 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 SLC16A4O15374 487 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 ST18O60284 1047 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 LRRN2O75325 713 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 CD2BP2O95400 341 aaKnown RBP12.81□□□□□ -0.36
VARS2-208ENST00000477052 DCNP07585 359 aaKnown RBP12.81□□□□□ -0.36
VARS2-208ENST00000477052 FGFR3P22607 806 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 RFX1P22670 979 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 TRAPPC10P48553 1259 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 EFNA5P52803 228 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 ARPP19P56211 112 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
VARS2-208ENST00000477052 CREMQ03060 361 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 MAPK7Q13164 816 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 PDIA5Q14554 519 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 AXDND1Q5T1B0 1012 aaPredicted RBP12.81□□□□□ -0.36
VARS2-208ENST00000477052 LIN9Q5TKA1 542 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 RINT1Q6NUQ1 792 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 CYP26C1Q6V0L0 522 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 DTWD2Q8NBA8 298 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms