RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 ARSHQ5FYA8 562 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 KIF12Q96FN5 646 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 LRRC4Q9HBW1 653 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 TXNDC16Q9P2K2 825 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 CNOT8Q9UFF9 292 aaKnown RBP11.28□□□□□ -0.6
TOP3B-210ENST00000444502 TAF1P21675 1872 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 SLC16A3O15427 465 aaKnown RBP11.28□□□□□ -0.6
TOP3B-210ENST00000444502 SNUPNO95149 360 aaKnown RBP11.28□□□□□ -0.6
TOP3B-210ENST00000444502 DR1Q01658 176 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 ADCY1Q08828 1119 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 GJC2Q5T442 439 aaPredicted RBP11.28□□□□□ -0.6
TOP3B-210ENST00000444502 ZNF720Q7Z2F6 126 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 PPP1R14CQ8TAE6 165 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 WDR18Q9BV38 432 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 IQCGQ9H095 443 aaKnown RBP11.28□□□□□ -0.6
TOP3B-210ENST00000444502 SLC40A1Q9NP59 571 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 NGRNQ9NPE2 291 aaKnown RBP11.28□□□□□ -0.6
TOP3B-210ENST00000444502 TARSL2A2RTX5 802 aaKnown RBP11.28□□□□□ -0.6
TOP3B-210ENST00000444502 MAP2K7O14733 419 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 RAD51CO43502 376 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 POLE2P56282 527 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 GPC5P78333 572 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 THEMIS2Q5TEJ8 643 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 TRAPPC12Q8WVT3 735 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 RFFLQ8WZ73 363 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 AGPAT1Q99943 283 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.28□□□□□ -0.67e-9■■□□□ 12.6
TOP3B-210ENST00000444502 PI4K2AQ9BTU6 479 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 MRIQ9BWK5 157 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 HEMGNQ9BXL5 484 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 CALN1Q9BXU9 219 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 HPCAL4Q9UM19 191 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 NOVA2Q9UNW9 492 aaKnown RBP11.28□□□□□ -0.6
TOP3B-210ENST00000444502 CXCL11O14625 94 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 GAS8O95995 478 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 KRT14P02533 472 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 ZNF286BP0CG31 522 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 SPATA31C1P0DKV0 1188 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 MYBL2P10244 700 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 CDK17Q00537 523 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 KRT39Q6A163 491 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 NME8Q8N427 588 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 ANKRD42Q8N9B4 389 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 C11orf70Q9BRQ4 267 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 CELF4Q9BZC1 486 aaKnown RBP11.28□□□□□ -0.6
TOP3B-210ENST00000444502 NMRK2Q9NPI5 230 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 GINM1Q9NU53 330 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 ANAPC7Q9UJX3 599 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 STK38LQ9Y2H1 464 aa11.28□□□□□ -0.6
TOP3B-210ENST00000444502 AKAP11Q9UKA4 1901 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 SNED1Q8TER0 1413 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 ZNF263O14978 683 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 ADORA2AP29274 412 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 GPC3P51654 580 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 ATN1P54259 1190 aaPredicted RBP11.27□□□□□ -0.6
TOP3B-210ENST00000444502 GUCY1A3Q02108 690 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 PGM5Q15124 567 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 KIZQ2M2Z5 673 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 SGO2Q562F6 1265 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 DNAJC24Q6P3W2 148 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 CCDC63Q8NA47 563 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.27□□□□□ -0.6
TOP3B-210ENST00000444502 SLC35C1Q96A29 364 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 TLR10Q9BXR5 811 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 OSGEPQ9NPF4 335 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 PLCB1Q9NQ66 1216 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 KCNH4Q9UQ05 1017 aa11.27□□□□□ -0.6
TOP3B-210ENST00000444502 MYH14Q7Z406 1995 aaKnown RBP11.27□□□□□ -0.61
TOP3B-210ENST00000444502 IGKV6D-41A0A0C4DH26 115 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 EME2A4GXA9 379 aaPredicted RBP11.27□□□□□ -0.61
TOP3B-210ENST00000444502 PIK3R2O00459 728 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 TTI1O43156 1089 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 CPP00450 1065 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 PLS3P13797 630 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 IFNAR2P48551 515 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 SEC24CP53992 1094 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 GLE1Q53GS7 698 aaKnown RBP11.27□□□□□ -0.61
TOP3B-210ENST00000444502 METTL23Q86XA0 190 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 SCN4BQ8IWT1 228 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 RHOT2Q8IXI1 618 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 WHAMMQ8TF30 809 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 HNRNPLLQ8WVV9 542 aaKnown RBP11.27□□□□□ -0.61
TOP3B-210ENST00000444502 BAP1Q92560 729 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 GPRASP2Q96D09 838 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 FMO2Q99518 471 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 POP1Q99575 1024 aaKnown RBP11.27□□□□□ -0.61
TOP3B-210ENST00000444502 TSC22D3Q99576 134 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 C2orf40Q9H1Z8 148 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 MROH8Q9H579 483 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 FAM114A2Q9NRY5 505 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 RAB20Q9NX57 234 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 EIF3HO15372 352 aaKnown RBP eCLIP11.27□□□□□ -0.612e-6■■□□□ 11.9
TOP3B-210ENST00000444502 MAFGO15525 162 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 OATP04181 439 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 GCLCP48506 637 aaPredicted RBP11.27□□□□□ -0.61
TOP3B-210ENST00000444502 PPATQ06203 517 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 ALS2CLQ60I27 953 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 TATDN1Q6P1N9 297 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 CBWD2Q8IUF1 395 aa11.27□□□□□ -0.61
TOP3B-210ENST00000444502 GPD1LQ8N335 351 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms