RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 RTN4RL1Q86UN2 441 aaPredicted RBP22.86■■□□□ 1.25
VPS13B-204ENST00000441350 DBF4BQ8NFT6 615 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 ZNF516Q92618 1163 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 CGRRF1Q99675 332 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 FTHL17Q9BXU8 183 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 RNF39Q9H2S5 420 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 RGS18Q9NS28 235 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 TOPORSQ9NS56 1045 aaPredicted RBP22.86■■□□□ 1.25
VPS13B-204ENST00000441350 A0A0U1RQF3 1178 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 A0A1W2PQC6 194 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 LACTBL1A8MY62 500 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 PMM2O15305 246 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 ITGB8P26012 769 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 RAB27AP51159 221 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 PTPN21Q16825 1174 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 CBWD6Q4V339 395 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 CBWD3Q5JTY5 395 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 CBWD5Q5RIA9 395 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 VSTM4Q8IW00 320 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 LINC01599Q8WXQ3 324 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 SEPT8Q92599 483 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 APBB2Q92870 758 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 PDLIM2Q96JY6 352 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 TSPYL2Q9H2G4 693 aaPredicted RBP22.86■■□□□ 1.25
VPS13B-204ENST00000441350 ASB7Q9H672 318 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 PLEKHA5Q9HAU0 1116 aa22.86■■□□□ 1.25
VPS13B-204ENST00000441350 PTPRJQ12913 1337 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 RALGAPA2Q2PPJ7 1873 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 GTPBP10A4D1E9 387 aaKnown RBP22.85■■□□□ 1.25
VPS13B-204ENST00000441350 RECQL4O94761 1208 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 RFC2P35250 354 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 GCLMP48507 274 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 ALKAL1Q6UXT8 129 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 C15orf39Q6ZRI6 1047 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 WDR49Q8IV35 697 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 CD302Q8IX05 232 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 VWCEQ96DN2 955 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 FAM212AQ96EL1 285 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 TMEM117Q9H0C3 514 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 TMEM8AQ9HCN3 771 aa22.85■■□□□ 1.25
VPS13B-204ENST00000441350 PRDM5Q9NQX1 630 aaPredicted RBP22.85■■□□□ 1.25
VPS13B-204ENST00000441350 P4HA2O15460 535 aa22.84■■□□□ 1.25
VPS13B-204ENST00000441350 N4BP1O75113 896 aaKnown RBP22.84■■□□□ 1.25
VPS13B-204ENST00000441350 TNNI1P19237 187 aa22.84■■□□□ 1.25
VPS13B-204ENST00000441350 YARSP54577 528 aaKnown RBP22.84■■□□□ 1.25
VPS13B-204ENST00000441350 KCNMA1Q12791 1236 aa22.84■■□□□ 1.25
VPS13B-204ENST00000441350 SNX27Q96L92 541 aa22.84■■□□□ 1.25
VPS13B-204ENST00000441350 SIK3Q9Y2K2 1263 aa22.84■■□□□ 1.25
VPS13B-204ENST00000441350 TRIP11Q15643 1979 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 C9IYK1 514 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 SKIP12755 728 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 AKAP5P24588 427 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 FAM189BP81408 668 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 MYL7Q01449 175 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 SYCP1Q15431 976 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 TCTN1Q2MV58 587 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 XKR4Q5GH76 650 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 SV2AQ7L0J3 742 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 EFCAB13Q8IY85 973 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 HACE1Q8IYU2 909 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 APOL6Q9BWW8 343 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 MMRN2Q9H8L6 949 aa22.83■■□□□ 1.25
VPS13B-204ENST00000441350 C4BPAP04003 597 aaKnown RBP22.82■■□□□ 1.24
VPS13B-204ENST00000441350 RAG1P15918 1043 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 ATF7P17544 494 aaPredicted RBP22.82■■□□□ 1.24
VPS13B-204ENST00000441350 MXI1P50539 228 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 AP3M2P53677 418 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 LMBRD2Q68DH5 695 aaPredicted RBP22.82■■□□□ 1.24
VPS13B-204ENST00000441350 KRT39Q6A163 491 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 SLC24A5Q71RS6 500 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 OR5B17Q8NGF7 314 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 FAM84AQ96KN4 292 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 CXCL16Q9H2A7 254 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 C1orf112Q9NSG2 853 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 COQ4Q9Y3A0 265 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 ITIH6Q6UXX5 1313 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 TULP1O00294 542 aaPredicted RBP22.82■■□□□ 1.24
VPS13B-204ENST00000441350 NFICP08651 508 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 ITGA4P13612 1032 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 ZACNQ401N2 412 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 SPECC1LQ69YQ0 1117 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 JADE1Q6IE81 842 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 MFSD5Q6N075 450 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 GBP6Q6ZN66 633 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 ZNF598Q86UK7 904 aaKnown RBP22.82■■□□□ 1.24
VPS13B-204ENST00000441350 ECHDC2Q86YB7 292 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 CRACR2AQ9BSW2 395 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 CNTN3Q9P232 1028 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 PARP2Q9UGN5 583 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 C2CD2Q9Y426 696 aa22.82■■□□□ 1.24
VPS13B-204ENST00000441350 MEIS3P2A8K0S8 358 aa22.81■■□□□ 1.24
VPS13B-204ENST00000441350 ENPP3O14638 875 aa22.81■■□□□ 1.24
VPS13B-204ENST00000441350 EXOC3L4Q17RC7 722 aa22.81■■□□□ 1.24
VPS13B-204ENST00000441350 DUOXA2Q1HG44 320 aa22.81■■□□□ 1.24
VPS13B-204ENST00000441350 EPC2Q52LR7 807 aa22.81■■□□□ 1.24
VPS13B-204ENST00000441350 AGMOQ6ZNB7 445 aa22.81■■□□□ 1.24
VPS13B-204ENST00000441350 DEFB128Q7Z7B8 93 aa22.81■■□□□ 1.24
VPS13B-204ENST00000441350 NT5DC4Q86YG4 428 aa22.81■■□□□ 1.24
VPS13B-204ENST00000441350 DERAQ9Y315 318 aa22.81■■□□□ 1.24
VPS13B-204ENST00000441350 PDCD11Q14690 1871 aaKnown RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms