RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 CGRRF1Q99675 332 aa11.2□□□□□ -0.62
CPNE1-218ENST00000439806 SH3GL2Q99962 352 aa11.2□□□□□ -0.62
CPNE1-218ENST00000439806 ZSWIM1Q9BR11 485 aa11.2□□□□□ -0.62
CPNE1-218ENST00000439806 PI4K2AQ9BTU6 479 aa11.2□□□□□ -0.62
CPNE1-218ENST00000439806 MSTO1Q9BUK6 570 aa11.2□□□□□ -0.62
CPNE1-218ENST00000439806 AZI2Q9H6S1 392 aa11.2□□□□□ -0.62
CPNE1-218ENST00000439806 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
CPNE1-218ENST00000439806 CWC15Q9P013 229 aaKnown RBP11.2□□□□□ -0.62
CPNE1-218ENST00000439806 ANKFY1Q9P2R3 1169 aa11.2□□□□□ -0.62
CPNE1-218ENST00000439806 UVRAGQ9P2Y5 699 aa11.2□□□□□ -0.62
CPNE1-218ENST00000439806 PPME1Q9Y570 386 aa11.2□□□□□ -0.62
CPNE1-218ENST00000439806 STYXL1Q9Y6J8 313 aa11.2□□□□□ -0.62
CPNE1-218ENST00000439806 A0A0G2JLL6 359 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-218ENST00000439806 TTI1O43156 1089 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 PEX10O60683 326 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 PHF2O75151 1096 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 HARSP12081 509 aaKnown RBP11.19□□□□□ -0.62
CPNE1-218ENST00000439806 OSBPP22059 807 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 EDNRBP24530 442 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 ACTN2P35609 894 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 TCF7P36402 384 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-218ENST00000439806 ACOT2P49753 483 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 NLRP11P59045 1033 aaKnown RBP11.19□□□□□ -0.62
CPNE1-218ENST00000439806 PTENP60484 403 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 MTMR3Q13615 1198 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 C15orf39Q6ZRI6 1047 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 PRRT2Q7Z6L0 340 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-218ENST00000439806 ADAT2Q7Z6V5 191 aaKnown RBP11.19□□□□□ -0.62
CPNE1-218ENST00000439806 ZNF677Q86XU0 584 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 ERO1BQ86YB8 467 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 ZBTB8OSQ8IWT0 167 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 ZNF526Q8TF50 670 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-218ENST00000439806 TCP11Q8WWU5 503 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 ZNF516Q92618 1163 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 TRIM11Q96F44 468 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 PCYT2Q99447 389 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 TARS2Q9BW92 718 aaKnown RBP11.19□□□□□ -0.62
CPNE1-218ENST00000439806 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-218ENST00000439806 DPH5Q9H2P9 285 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 RBAKQ9NYW8 714 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-218ENST00000439806 RNF181Q9P0P0 153 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 CNOT8Q9UFF9 292 aaKnown RBP11.19□□□□□ -0.62
CPNE1-218ENST00000439806 AMACRQ9UHK6 382 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 TRPC6Q9Y210 931 aa11.19□□□□□ -0.62
CPNE1-218ENST00000439806 MCM3APO60318 1980 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 GOLGA6L10A6NI86 522 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 BHMG1C9JSJ3 638 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-218ENST00000439806 NOP56O00567 594 aaKnown RBP11.18□□□□□ -0.62
CPNE1-218ENST00000439806 CXCL11O14625 94 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 ERLIN2O94905 339 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 C4BPAP04003 597 aaKnown RBP11.18□□□□□ -0.62
CPNE1-218ENST00000439806 IVLP07476 585 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 MYBL1P10243 752 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 TGFB3P10600 412 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 DR1Q01658 176 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 CAPSQ13938 189 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 DHX34Q14147 1143 aaKnown RBP11.18□□□□□ -0.62
CPNE1-218ENST00000439806 TARBP2Q15633 366 aaKnown RBP11.18□□□□□ -0.62
CPNE1-218ENST00000439806 ZSCAN26Q16670 478 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 ZACNQ401N2 412 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 IER5Q5VY09 327 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 TDRD10Q5VZ19 366 aaKnown RBP11.18□□□□□ -0.62
CPNE1-218ENST00000439806 KCNV1Q6PIU1 500 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 METTL7BQ6UX53 244 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 LRIG3Q6UXM1 1119 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 DLK2Q6UY11 383 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 EEPD1Q7L9B9 569 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 DDX42Q86XP3 938 aaKnown RBP eCLIP11.18□□□□□ -0.62
CPNE1-218ENST00000439806 CD302Q8IX05 232 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 EXOC8Q8IYI6 725 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 ANKRD13AQ8IZ07 590 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 ALG3Q92685 438 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 ELMO3Q96BJ8 720 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 ZBTB45Q96K62 511 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-218ENST00000439806 RUNDC3BQ96NL0 473 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 CEP89Q96ST8 783 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 MMP19Q99542 508 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 TRIM51Q9BSJ1 452 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 ACP6Q9NPH0 428 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.18□□□□□ -0.622e-10■□□□□ 11.3
CPNE1-218ENST00000439806 PLAAQ9Y263 795 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 PCDHB4Q9Y5E5 795 aa11.18□□□□□ -0.62
CPNE1-218ENST00000439806 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 IRF6O14896 467 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 DAPK3O43293 454 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 GAS2O43903 313 aaKnown RBP11.17□□□□□ -0.62
CPNE1-218ENST00000439806 ADCY3O60266 1144 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 MAFO75444 373 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-218ENST00000439806 CNMDO75829 334 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 TBXAS1P24557 533 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-218ENST00000439806 MAPK4P31152 587 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 CHRNA3P32297 505 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 EFNA5P52803 228 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 RWDD2BP57060 319 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 CLDN10P78369 228 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 KCTD2Q14681 263 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 SURF1Q15526 300 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 TRADDQ15628 312 aa11.17□□□□□ -0.62
CPNE1-218ENST00000439806 TTMPQ5BVD1 217 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms