RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 CAMK1Q14012 370 aa19.26■□□□□ 0.67
EPCAM-203ENST00000419334 NAB2Q15742 525 aa19.26■□□□□ 0.67
EPCAM-203ENST00000419334 BMT2Q1RMZ1 405 aa19.26■□□□□ 0.67
EPCAM-203ENST00000419334 SEZ6Q53EL9 994 aa19.26■□□□□ 0.67
EPCAM-203ENST00000419334 SCFD1Q8WVM8 642 aa19.26■□□□□ 0.67
EPCAM-203ENST00000419334 POF1BQ8WVV4 589 aa19.26■□□□□ 0.67
EPCAM-203ENST00000419334 CCDC47Q96A33 483 aaKnown RBP19.26■□□□□ 0.67
EPCAM-203ENST00000419334 SLC39A2Q9NP94 309 aa19.26■□□□□ 0.67
EPCAM-203ENST00000419334 CNTN3Q9P232 1028 aa19.26■□□□□ 0.67
EPCAM-203ENST00000419334 FAN1Q9Y2M0 1017 aa19.26■□□□□ 0.67
EPCAM-203ENST00000419334 NRP1O14786 923 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 MEFVO15553 781 aaPredicted RBP19.25■□□□□ 0.67
EPCAM-203ENST00000419334 RHOBTB3O94955 611 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 GARTP22102 1010 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 DNAJB1P25685 340 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 HOXD13P35453 343 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 TNFSF9P41273 254 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 KRT17Q04695 432 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 STK4Q13043 487 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 TUSC3Q13454 348 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 KCNB1Q14721 858 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 SLC10A6Q3KNW5 377 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 TMEM173Q86WV6 379 aaPredicted RBP19.25■□□□□ 0.67
EPCAM-203ENST00000419334 ELOA2Q8IYF1 753 aaPredicted RBP19.25■□□□□ 0.67
EPCAM-203ENST00000419334 MAFAQ8NHW3 353 aaPredicted RBP19.25■□□□□ 0.67
EPCAM-203ENST00000419334 POMGNT1Q8WZA1 660 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 TMEM169Q96HH4 297 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 IGSF21Q96ID5 467 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 PPP1R10Q96QC0 940 aaKnown RBP19.25■□□□□ 0.67
EPCAM-203ENST00000419334 PLEKHA5Q9HAU0 1116 aa19.25■□□□□ 0.67
EPCAM-203ENST00000419334 CPSF3Q9UKF6 684 aaKnown RBP19.25■□□□□ 0.67
EPCAM-203ENST00000419334 AGO2Q9UKV8 859 aaKnown RBP19.25■□□□□ 0.67
EPCAM-203ENST00000419334 SMIM28A0A1B0GU29 152 aa19.24■□□□□ 0.67
EPCAM-203ENST00000419334 CXCL8P10145 99 aa19.24■□□□□ 0.67
EPCAM-203ENST00000419334 KCNE1P15382 129 aa19.24■□□□□ 0.67
EPCAM-203ENST00000419334 POU5F1Q01860 360 aaKnown RBP19.24■□□□□ 0.67
EPCAM-203ENST00000419334 TIGD5Q53EQ6 642 aa19.24■□□□□ 0.67
EPCAM-203ENST00000419334 GLRA4Q5JXX5 417 aa19.24■□□□□ 0.67
EPCAM-203ENST00000419334 ZBTB41Q5SVQ8 909 aa19.24■□□□□ 0.67
EPCAM-203ENST00000419334 KIAA0895Q8NCT3 520 aa19.24■□□□□ 0.67
EPCAM-203ENST00000419334 PUF60Q9UHX1 559 aaKnown RBP19.24■□□□□ 0.67
EPCAM-203ENST00000419334 HOOK1Q9UJC3 728 aaKnown RBP19.24■□□□□ 0.67
EPCAM-203ENST00000419334 MYO7AQ13402 2215 aa19.24■□□□□ 0.67
EPCAM-203ENST00000419334 TTC26A0AVF1 554 aa19.23■□□□□ 0.67
EPCAM-203ENST00000419334 KINO60870 393 aaKnown RBP19.23■□□□□ 0.67
EPCAM-203ENST00000419334 PRPF40AO75400 957 aaKnown RBP19.23■□□□□ 0.67
EPCAM-203ENST00000419334 ADRB2P07550 413 aa19.23■□□□□ 0.67
EPCAM-203ENST00000419334 OR1G1P47890 313 aa19.23■□□□□ 0.67
EPCAM-203ENST00000419334 PNOCQ13519 176 aa19.23■□□□□ 0.67
EPCAM-203ENST00000419334 ENOX2Q16206 610 aaKnown RBP19.23■□□□□ 0.67
EPCAM-203ENST00000419334 BCL7CQ8WUZ0 217 aaPredicted RBP19.23■□□□□ 0.67
EPCAM-203ENST00000419334 ZMAT2Q96NC0 199 aaKnown RBP19.23■□□□□ 0.67
EPCAM-203ENST00000419334 RPF1Q9H9Y2 349 aaKnown RBP19.23■□□□□ 0.67
EPCAM-203ENST00000419334 TLR9Q9NR96 1032 aa19.23■□□□□ 0.67
EPCAM-203ENST00000419334 SLC38A7Q9NVC3 462 aa19.23■□□□□ 0.67
EPCAM-203ENST00000419334 MARCH5Q9NX47 278 aa19.23■□□□□ 0.67
EPCAM-203ENST00000419334 PRG3Q9Y2Y8 225 aaPredicted RBP19.23■□□□□ 0.67
EPCAM-203ENST00000419334 KIAA0391O15091 583 aaKnown RBP19.22■□□□□ 0.67
EPCAM-203ENST00000419334 TGFB1I1O43294 461 aa19.22■□□□□ 0.67
EPCAM-203ENST00000419334 LDHAP00338 332 aaKnown RBP19.22■□□□□ 0.67
EPCAM-203ENST00000419334 ACOT2P49753 483 aa19.22■□□□□ 0.67
EPCAM-203ENST00000419334 SNRPFP62306 86 aaKnown RBP19.22■□□□□ 0.67
EPCAM-203ENST00000419334 PPP2R3AQ06190 1150 aa19.22■□□□□ 0.67
EPCAM-203ENST00000419334 KNOP1Q1ED39 458 aaKnown RBP19.22■□□□□ 0.67
EPCAM-203ENST00000419334 PDE12Q6L8Q7 609 aaKnown RBP19.22■□□□□ 0.67
EPCAM-203ENST00000419334 ARMCX5Q6P1M9 558 aa19.22■□□□□ 0.67
EPCAM-203ENST00000419334 DDX53Q86TM3 631 aaKnown RBP19.22■□□□□ 0.67
EPCAM-203ENST00000419334 CD302Q8IX05 232 aa19.22■□□□□ 0.67
EPCAM-203ENST00000419334 NELFCDQ8IXH7 590 aa19.22■□□□□ 0.67
EPCAM-203ENST00000419334 MICALL1Q8N3F8 863 aa19.22■□□□□ 0.67
EPCAM-203ENST00000419334 GBP4Q96PP9 640 aa19.22■□□□□ 0.67
EPCAM-203ENST00000419334 TSPAN18Q96SJ8 248 aa19.22■□□□□ 0.67
EPCAM-203ENST00000419334 CBWD1Q9BRT8 395 aa19.22■□□□□ 0.67
EPCAM-203ENST00000419334 COLEC11Q9BWP8 271 aa19.22■□□□□ 0.67
EPCAM-203ENST00000419334 NSUN3Q9H649 340 aaKnown RBP19.22■□□□□ 0.67
EPCAM-203ENST00000419334 STK39Q9UEW8 545 aa19.22■□□□□ 0.67
EPCAM-203ENST00000419334 CASTOR2A6NHX0 329 aa19.21■□□□□ 0.67
EPCAM-203ENST00000419334 FSCN2O14926 492 aa19.21■□□□□ 0.67
EPCAM-203ENST00000419334 IRS1P35568 1242 aa19.21■□□□□ 0.67
EPCAM-203ENST00000419334 HSP90AA2PQ14568 343 aaPredicted RBP19.21■□□□□ 0.67
EPCAM-203ENST00000419334 CRELD2Q6UXH1 353 aaPredicted RBP19.21■□□□□ 0.67
EPCAM-203ENST00000419334 HS2ST1Q7LGA3 356 aa19.21■□□□□ 0.67
EPCAM-203ENST00000419334 SPATA20Q8TB22 786 aa19.21■□□□□ 0.67
EPCAM-203ENST00000419334 UROC1Q96N76 676 aa19.21■□□□□ 0.67
EPCAM-203ENST00000419334 GSDMAQ96QA5 445 aa19.21■□□□□ 0.67
EPCAM-203ENST00000419334 PAAF1Q9BRP4 392 aa19.21■□□□□ 0.67
EPCAM-203ENST00000419334 CGNQ9P2M7 1197 aaKnown RBP19.21■□□□□ 0.67
EPCAM-203ENST00000419334 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.21■□□□□ 0.67
EPCAM-203ENST00000419334 LACTBL1A8MY62 500 aa19.2■□□□□ 0.66
EPCAM-203ENST00000419334 SMC2O95347 1197 aa19.2■□□□□ 0.66
EPCAM-203ENST00000419334 EFEMP2O95967 443 aa19.2■□□□□ 0.66
EPCAM-203ENST00000419334 ERVFC1P60507 584 aa19.2■□□□□ 0.66
EPCAM-203ENST00000419334 SOX4Q06945 474 aaPredicted RBP19.2■□□□□ 0.66
EPCAM-203ENST00000419334 CCDC85BQ15834 202 aaPredicted RBP19.2■□□□□ 0.66
EPCAM-203ENST00000419334 SAAL1Q96ER3 474 aa19.2■□□□□ 0.66
EPCAM-203ENST00000419334 VN1R3Q9BXE9 311 aa19.2■□□□□ 0.66
EPCAM-203ENST00000419334 ZBP1Q9H171 429 aa19.2■□□□□ 0.66
EPCAM-203ENST00000419334 NGRNQ9NPE2 291 aaKnown RBP19.2■□□□□ 0.66
EPCAM-203ENST00000419334 AGPAT3Q9NRZ7 376 aa19.2■□□□□ 0.66
EPCAM-203ENST00000419334 RMND1Q9NWS8 449 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms