RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ATXN7L2Q5T6C5 722 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P23-201ENST00000414981 SYDE2Q5VT97 1194 aa4.87□□□□□ -1.63
HMGB3P23-201ENST00000414981 METRNLQ641Q3 311 aa4.87□□□□□ -1.63
HMGB3P23-201ENST00000414981 OTUD7BQ6GQQ9 843 aa4.87□□□□□ -1.63
HMGB3P23-201ENST00000414981 PGM2L1Q6PCE3 622 aa4.87□□□□□ -1.63
HMGB3P23-201ENST00000414981 C1orf162Q8NEQ5 155 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P23-201ENST00000414981 UHRF1Q96T88 793 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P23-201ENST00000414981 LANCL2Q9NS86 450 aa4.87□□□□□ -1.63
HMGB3P23-201ENST00000414981 TRPM5Q9NZQ8 1165 aa4.87□□□□□ -1.63
HMGB3P23-201ENST00000414981 DKK2Q9UBU2 259 aa4.87□□□□□ -1.63
HMGB3P23-201ENST00000414981 HS3ST4Q9Y661 456 aa4.87□□□□□ -1.63
HMGB3P23-201ENST00000414981 PNPLA7Q6ZV29 1317 aa4.87□□□□□ -1.63
HMGB3P23-201ENST00000414981 KLHL33A6NCF5 533 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 TMEM191CA6NGB0 347 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 TEX33O43247 280 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 OSMP13725 252 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 BMPR1AP36894 532 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 UBXN2BQ14CS0 331 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 SEPT2Q15019 361 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 PTPAQ15257 358 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 TIGD2Q4W5G0 525 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 LY6G5CQ5SRR4 150 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 FAM102AQ5T9C2 384 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 ZNF627Q7L945 461 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 SLC2A13Q96QE2 648 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 MRI1Q9BV20 369 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 SENP6Q9GZR1 1112 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 ZNF768Q9H5H4 540 aaKnown RBP4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 MANSC1Q9H8J5 431 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 DMRT3Q9NQL9 472 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 TMEM140Q9NV12 185 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 MKS1Q9NXB0 559 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 SIK3Q9Y2K2 1263 aa4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 WDR33Q9C0J8 1336 aaKnown RBP4.86□□□□□ -1.63
HMGB3P23-201ENST00000414981 ABHD16AO95870 558 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 POMCP01189 267 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 SPATA31D3P0C874 917 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 ZFP36P26651 326 aaKnown RBP4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 SLC6A9P48067 706 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 RNASE9P60153 205 aaKnown RBP4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 AFMIDQ63HM1 303 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 Q6ZPA2 131 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 LRRC55Q6ZSA7 311 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 SPATA31D4Q6ZUB0 917 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 LDLRAD3Q86YD5 345 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 PLXDC1Q8IUK5 500 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 DRC7Q8IY82 874 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 PRPF38AQ8NAV1 312 aaKnown RBP4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 STON2Q8WXE9 905 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 JADE3Q92613 823 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 CHFRQ96EP1 664 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 CEP89Q96ST8 783 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 PSMD1Q99460 953 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 SLITRK6Q9H5Y7 841 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 AKIP1Q9NQ31 210 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 DNM3Q9UQ16 869 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 SPEF1Q9Y4P9 236 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 WASHC2CQ9Y4E1 1318 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 EEA1Q15075 1411 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 COL4A3Q01955 1670 aa4.85□□□□□ -1.63
HMGB3P23-201ENST00000414981 ARID4BQ4LE39 1312 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 WNT10BO00744 389 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 ZNF185O15231 689 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 FOXN1O15353 648 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 HLA-DOAP06340 250 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 ATP5JP18859 108 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 CDKN1CP49918 316 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 FAM189BP81408 668 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 ITKQ08881 620 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 MTMR1Q13613 665 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 CLUL1Q15846 466 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 BEAN1Q3B7T3 259 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 PDCD4Q53EL6 469 aaKnown RBP4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 AGAP9Q5VTM2 703 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 LAIR1Q6GTX8 287 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 ARMC6Q6NXE6 501 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 SEM1Q6ZVN7 128 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 MRGPRGQ86SM5 289 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 ARHGEF19Q8IW93 802 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 RHOT2Q8IXI1 618 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 OR2I1PQ8NGU4 316 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 PROKR1Q8TCW9 393 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 NRG4Q8WWG1 115 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 FUBP3Q96I24 572 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 C7orf25Q9BPX7 421 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 IKZF4Q9H2S9 585 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 PRDM16Q9HAZ2 1276 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 SAP30BPQ9UHR5 308 aaKnown RBP4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 TRHDEQ9UKU6 1024 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 ATP11BQ9Y2G3 1177 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 MRFAP1Q9Y605 127 aa4.84□□□□□ -1.63
HMGB3P23-201ENST00000414981 A0A087X1B8 175 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 SHTN1A0MZ66 631 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 GABRDO14764 452 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 PCDHGA12O60330 932 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 NDUFS2O75306 463 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 NCR1O76036 304 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 RAP2AP10114 183 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 KRT4P19013 534 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 CHN2P52757 468 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms