RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 BRDTQ58F21 947 aaPredicted RBP17.02■□□□□ 0.31
HOXD3-202ENST00000410016 ZNF772Q68DY9 489 aaPredicted RBP17.02■□□□□ 0.31
HOXD3-202ENST00000410016 OTUD6AQ7L8S5 288 aa17.02■□□□□ 0.31
HOXD3-202ENST00000410016 NLRX1Q86UT6 975 aa17.02■□□□□ 0.31
HOXD3-202ENST00000410016 CCDC105Q8IYK2 499 aa17.02■□□□□ 0.31
HOXD3-202ENST00000410016 ZNF516Q92618 1163 aa17.02■□□□□ 0.31
HOXD3-202ENST00000410016 CENPTQ96BT3 561 aa17.02■□□□□ 0.31
HOXD3-202ENST00000410016 PI4K2AQ9BTU6 479 aa17.02■□□□□ 0.31
HOXD3-202ENST00000410016 ADAM7Q9H2U9 754 aa17.02■□□□□ 0.31
HOXD3-202ENST00000410016 XPNPEP1Q9NQW7 623 aa17.02■□□□□ 0.31
HOXD3-202ENST00000410016 FSCN2O14926 492 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 MAFGO15525 162 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 KCNA2P16389 499 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 ENPEPQ07075 957 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 ZNF568Q3ZCX4 644 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 ERMARDQ5T6L9 678 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 GPD1LQ8N335 351 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 GPRASP2Q96D09 838 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 ATG4CQ96DT6 458 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 FAM84AQ96KN4 292 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 TMEM109Q9BVC6 243 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 EFCC1Q9HA90 598 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 GINM1Q9NU53 330 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 STK32BQ9NY57 414 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 PTPN22Q9Y2R2 807 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 RARGP13631 454 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 MMP13P45452 471 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 CYFIP1Q7L576 1253 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 SLCO2A1Q92959 643 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 RUNDC3BQ96NL0 473 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 CAMKK2Q96RR4 588 aa17.01■□□□□ 0.31
HOXD3-202ENST00000410016 MTRF1LQ9UGC7 380 aaKnown RBP17.01■□□□□ 0.31
HOXD3-202ENST00000410016 FER1L6Q2WGJ9 1857 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 HNRNPDLO14979 420 aaKnown RBP17■□□□□ 0.31
HOXD3-202ENST00000410016 CLDN3O15551 220 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 GARTP22102 1010 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 RTP1P59025 263 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 CLDN10P78369 228 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 TNFAIP8L3Q5GJ75 292 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 CHADLQ6NUI6 762 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 ENOSF1Q7L5Y1 443 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 USP37Q86T82 979 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 TRIM7Q9C029 511 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 RNF146Q9NTX7 359 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 TNS1Q9HBL0 1735 aaKnown RBP17■□□□□ 0.31
HOXD3-202ENST00000410016 RIPK2O43353 540 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 ZC3H11AO75152 810 aaKnown RBP eCLIP17■□□□□ 0.31
HOXD3-202ENST00000410016 FDX1P10109 184 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 CCND2P30279 289 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 IFI35P80217 286 aaPredicted RBP17■□□□□ 0.31
HOXD3-202ENST00000410016 EN1Q05925 392 aaPredicted RBP17■□□□□ 0.31
HOXD3-202ENST00000410016 FBXW10Q5XX13 1052 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 SWSAP1Q6NVH7 229 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 REPS2Q8NFH8 660 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 XPO6Q96QU8 1125 aaKnown RBP17■□□□□ 0.31
HOXD3-202ENST00000410016 FAM213AQ9BRX8 229 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 ARHGAP28Q9P2N2 729 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 CTDP1Q9Y5B0 961 aaPredicted RBP17■□□□□ 0.31
HOXD3-202ENST00000410016 CAPN7Q9Y6W3 813 aa17■□□□□ 0.31
HOXD3-202ENST00000410016 TLDC2A0PJX2 215 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 DGAT1O75907 488 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 KRT5P13647 590 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 SCP2P22307 547 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 FGFR4P22455 802 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 SLMAPQ14BN4 828 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 LLGL1Q15334 1064 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 C6orf118Q5T5N4 469 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 CIAPIN1Q6FI81 312 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 MCOLN2Q8IZK6 566 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 ATP6V0A1Q93050 837 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 SEC16BQ96JE7 1060 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 MYPNQ86TC9 1320 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 DRD4P21917 467 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 TNFAIP1Q13829 316 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 CCDC60Q8IWA6 550 aaPredicted RBP16.99■□□□□ 0.31
HOXD3-202ENST00000410016 CNPY4Q8N129 248 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 MCPH1Q8NEM0 835 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 ZNF317Q96PQ6 595 aaPredicted RBP16.99■□□□□ 0.31
HOXD3-202ENST00000410016 FAM129AQ9BZQ8 928 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 AZI2Q9H6S1 392 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 AVENQ9NQS1 362 aaPredicted RBP16.99■□□□□ 0.31
HOXD3-202ENST00000410016 AAASQ9NRG9 546 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 ANAPC7Q9UJX3 599 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 MROH7Q68CQ1 1323 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 PASKQ96RG2 1323 aa16.99■□□□□ 0.31
HOXD3-202ENST00000410016 ECEL1O95672 775 aa16.98■□□□□ 0.31
HOXD3-202ENST00000410016 CHN1P15882 459 aa16.98■□□□□ 0.31
HOXD3-202ENST00000410016 MAPK4P31152 587 aa16.98■□□□□ 0.31
HOXD3-202ENST00000410016 WNT7BP56706 349 aa16.98■□□□□ 0.31
HOXD3-202ENST00000410016 ZNF280AP59817 542 aaPredicted RBP16.98■□□□□ 0.31
HOXD3-202ENST00000410016 ARMC9Q7Z3E5 817 aa16.98■□□□□ 0.31
HOXD3-202ENST00000410016 C1orf54Q8WWF1 131 aa16.98■□□□□ 0.31
HOXD3-202ENST00000410016 ATXN2LQ8WWM7 1075 aaKnown RBP16.98■□□□□ 0.31
HOXD3-202ENST00000410016 HERPUD2Q9BSE4 406 aa16.98■□□□□ 0.31
HOXD3-202ENST00000410016 OSBPL7Q9BZF2 842 aa16.98■□□□□ 0.31
HOXD3-202ENST00000410016 CYP26B1Q9NR63 512 aa16.98■□□□□ 0.31
HOXD3-202ENST00000410016 ZNFX1Q9P2E3 1918 aaKnown RBP16.98■□□□□ 0.31
HOXD3-202ENST00000410016 RGS16O15492 202 aaPredicted RBP16.97■□□□□ 0.31
HOXD3-202ENST00000410016 AGTP01019 485 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 RRM1P23921 792 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms