RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TBX20Q9UMR3 447 aa17.82■□□□□ 0.44
PCDHA13-202ENST00000409494 HSD17B4P51659 736 aa17.82■□□□□ 0.44
PCDHA13-202ENST00000409494 DHX9Q08211 1270 aaKnown RBP17.82■□□□□ 0.44
PCDHA13-202ENST00000409494 ADCY2Q08462 1091 aa17.82■□□□□ 0.44
PCDHA13-202ENST00000409494 PTPAQ15257 358 aa17.82■□□□□ 0.44
PCDHA13-202ENST00000409494 NTRK3Q16288 839 aa17.82■□□□□ 0.44
PCDHA13-202ENST00000409494 SLC18A3Q16572 532 aa17.82■□□□□ 0.44
PCDHA13-202ENST00000409494 C6orf118Q5T5N4 469 aa17.82■□□□□ 0.44
PCDHA13-202ENST00000409494 RAPH1Q70E73 1250 aa17.82■□□□□ 0.44
PCDHA13-202ENST00000409494 ADGRA1Q86SQ6 560 aa17.82■□□□□ 0.44
PCDHA13-202ENST00000409494 ANGPTL3Q9Y5C1 460 aa17.82■□□□□ 0.44
PCDHA13-202ENST00000409494 VWA5AO00534 786 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 KRT37O76014 449 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 GUCY2CP25092 1073 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 DRP2Q13474 957 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 INTS9Q9NV88 658 aaKnown RBP17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 LSM7Q9UK45 103 aaKnown RBP17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 SNX9Q9Y5X1 595 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 ZMYM2Q9UBW7 1377 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 POC1B-GALNT4F8VUJ3 575 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 GPC4O75487 556 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 BCAR1P56945 870 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 ARHGEF2Q92974 986 aaKnown RBP17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 POLIQ9UNA4 740 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 ATP8A1Q9Y2Q0 1164 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 NR1D1P20393 614 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 FMR1Q06787 632 aaKnown RBP eCLIP17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 COLEC11Q9BWP8 271 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 PSMD3O43242 534 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 KLC3Q6P597 504 aa17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 SYDE1Q6ZW31 735 aaPredicted RBP17.81■□□□□ 0.44
PCDHA13-202ENST00000409494 MYOM1P52179 1685 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 UCHL3P15374 230 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 TSNAXIP1Q2TAA8 658 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 PLA2G4FQ68DD2 849 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 ARHGAP18Q8N392 663 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 ERGIC2Q96RQ1 377 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 TMEM51Q9NW97 253 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 INTUQ9ULD6 942 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 NFU1Q9UMS0 254 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 CYBBP04839 570 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 KRT3P12035 628 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 PIGHQ14442 188 aaPredicted RBP17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 RBM43Q6ZSC3 357 aaKnown RBP17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 NYAP1Q6ZVC0 841 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 SCG3Q8WXD2 468 aaKnown RBP17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 RAB3IPQ96QF0 476 aaPredicted RBP17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 MON2Q7Z3U7 1717 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 PDHXO00330 501 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 PPP1R12AO14974 1030 aaPredicted RBP17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 PMLP29590 882 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 CCDC197Q8NCU1 140 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 FAF2Q96CS3 445 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 DDX23Q9BUQ8 820 aaKnown RBP17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 HSPA8P11142 646 aaKnown RBP17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 ACOT2P49753 483 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 TAF6P49848 677 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 BBS9Q3SYG4 887 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 TMC2Q8TDI7 906 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 CDCA5Q96FF9 252 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 UBN1Q9NPG3 1134 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 PRDM5Q9NQX1 630 aaPredicted RBP17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 LRRC4BQ9NT99 713 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 KBTBD4Q9NVX7 518 aa17.8■□□□□ 0.44
PCDHA13-202ENST00000409494 NLRP11P59045 1033 aaKnown RBP17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 GLYCTKQ8IVS8 523 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 AFG1LQ8WV93 481 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 POLD4Q9HCU8 107 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 NFAT5O94916 1531 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 EVI5O60447 810 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 HLA-DRAP01903 254 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 MX2P20592 715 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 ADORA2BP29275 332 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 LAMB3Q13751 1172 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 HEATR6Q6AI08 1181 aaKnown RBP17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 STKLD1Q8NE28 680 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 AGO4Q9HCK5 861 aaKnown RBP17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 SIGLEC1Q9BZZ2 1709 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 HMGB1P1B2RPK0 211 aaPredicted RBP17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 TOM1L1O75674 476 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 SLC8A1P32418 973 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 PASD1Q8IV76 773 aa17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 RBBP8NLQ8NC74 664 aaPredicted RBP17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 IRX2Q9BZI1 471 aaPredicted RBP17.79■□□□□ 0.44
PCDHA13-202ENST00000409494 CFAP69A5D8W1 941 aa17.78■□□□□ 0.44
PCDHA13-202ENST00000409494 MYO1CO00159 1063 aa17.78■□□□□ 0.44
PCDHA13-202ENST00000409494 RASGRF2O14827 1237 aa17.78■□□□□ 0.44
PCDHA13-202ENST00000409494 KRT38O76015 456 aa17.78■□□□□ 0.44
PCDHA13-202ENST00000409494 MYBP10242 640 aa17.78■□□□□ 0.44
PCDHA13-202ENST00000409494 GFPT1Q06210 699 aaPredicted RBP17.78■□□□□ 0.44
PCDHA13-202ENST00000409494 DHX34Q14147 1143 aaKnown RBP17.78■□□□□ 0.44
PCDHA13-202ENST00000409494 TAF2Q6P1X5 1199 aa17.78■□□□□ 0.44
PCDHA13-202ENST00000409494 REM2Q8IYK8 340 aaPredicted RBP17.78■□□□□ 0.44
PCDHA13-202ENST00000409494 ATP8B4Q8TF62 1192 aa17.78■□□□□ 0.44
PCDHA13-202ENST00000409494 SKA2Q8WVK7 121 aaPredicted RBP17.78■□□□□ 0.44
PCDHA13-202ENST00000409494 STK38LQ9Y2H1 464 aa17.78■□□□□ 0.44
PCDHA13-202ENST00000409494 COL14A1Q05707 1796 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms