RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 NOL9Q5SY16 702 aaKnown RBP16.54■□□□□ 0.24
CPSF7-202ENST00000394888 ZBTB45Q96K62 511 aaPredicted RBP16.54■□□□□ 0.24
CPSF7-202ENST00000394888 WRNIP1Q96S55 665 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 NUP85Q9BW27 656 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 JPH1Q9HDC5 661 aaPredicted RBP16.54■□□□□ 0.24
CPSF7-202ENST00000394888 GTF3C4Q9UKN8 822 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 MAFGO15525 162 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 GLRA2P23416 452 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 ICAM3P32942 547 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 DR1Q01658 176 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 DMP1Q13316 513 aaPredicted RBP16.54■□□□□ 0.24
CPSF7-202ENST00000394888 ZACNQ401N2 412 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 CEP170P1Q96L14 293 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 ZBTB42B2RXF5 422 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 FDX1P10109 184 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 CNTN2Q02246 1040 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 DRP2Q13474 957 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 PTGISQ16647 500 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 BRDTQ58F21 947 aaPredicted RBP16.54■□□□□ 0.24
CPSF7-202ENST00000394888 SPOPLQ6IQ16 392 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 ACAD10Q6JQN1 1059 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 MON1BQ7L1V2 547 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 FBXO25Q8TCJ0 367 aa16.54■□□□□ 0.24
CPSF7-202ENST00000394888 CCDC169A6NNP5 214 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 CEP85LQ5SZL2 805 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 TREML2Q5T2D2 321 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 LMBRD2Q68DH5 695 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-202ENST00000394888 RHBDF2Q6PJF5 856 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 GPD1LQ8N335 351 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 ZNF564Q8TBZ8 553 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-202ENST00000394888 VTI1AQ96AJ9 217 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 SLC9A2Q9UBY0 812 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 BPTFQ12830 3046 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 SUPT20HL2P0C7V6 817 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 EDNRBP24530 442 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 PSMD6Q15008 389 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 SUPT20HL1Q3ZLR7 823 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 SH3D19Q5HYK7 790 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 SPDYCQ5MJ68 293 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 ANGEL2Q5VTE6 544 aaKnown RBP16.53■□□□□ 0.24
CPSF7-202ENST00000394888 FMNL3Q8IVF7 1028 aa16.53■□□□□ 0.24
CPSF7-202ENST00000394888 TCRBV5S1A1TA0A578 114 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 HMGB1P1B2RPK0 211 aaPredicted RBP16.52■□□□□ 0.24
CPSF7-202ENST00000394888 SOCS7O14512 581 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 NUDT17P0C025 328 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 CCT5P48643 541 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 MKRN4PQ13434 485 aaPredicted RBP16.52■□□□□ 0.24
CPSF7-202ENST00000394888 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.52■□□□□ 0.24
CPSF7-202ENST00000394888 FAM213AQ9BRX8 229 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 POLR3FQ9H1D9 316 aaPredicted RBP16.52■□□□□ 0.24
CPSF7-202ENST00000394888 BTBD7Q9P203 1132 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 GSTTP1A0A1W2PQM5 241 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 MIF4GDA9UHW6 222 aaKnown RBP16.52■□□□□ 0.24
CPSF7-202ENST00000394888 DGAT1O75907 488 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 PAEPP09466 180 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 MDH1P40925 334 aaKnown RBP16.52■□□□□ 0.24
CPSF7-202ENST00000394888 KLF1Q13351 362 aaPredicted RBP16.52■□□□□ 0.24
CPSF7-202ENST00000394888 MESDQ14696 234 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 SLC17A8Q8NDX2 589 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 NSUN6Q8TEA1 469 aaKnown RBP16.52■□□□□ 0.24
CPSF7-202ENST00000394888 SLCO2A1Q92959 643 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 CTTNBP2NLQ9P2B4 639 aa16.52■□□□□ 0.24
CPSF7-202ENST00000394888 CCDC172P0C7W6 258 aa16.52■□□□□ 0.23
CPSF7-202ENST00000394888 SEC24CP53992 1094 aa16.52■□□□□ 0.23
CPSF7-202ENST00000394888 MFAP3P55082 362 aa16.52■□□□□ 0.23
CPSF7-202ENST00000394888 DHX34Q14147 1143 aaKnown RBP16.52■□□□□ 0.23
CPSF7-202ENST00000394888 SLC13A5Q86YT5 568 aaPredicted RBP16.52■□□□□ 0.23
CPSF7-202ENST00000394888 DDX27Q96GQ7 796 aaKnown RBP16.52■□□□□ 0.23
CPSF7-202ENST00000394888 CCDC113Q9H0I3 377 aa16.52■□□□□ 0.23
CPSF7-202ENST00000394888 PORCNQ9H237 461 aa16.52■□□□□ 0.23
CPSF7-202ENST00000394888 RSPH14Q9UHP6 348 aa16.52■□□□□ 0.23
CPSF7-202ENST00000394888 SNCAIPQ9Y6H5 919 aa16.52■□□□□ 0.23
CPSF7-202ENST00000394888 MEFVO15553 781 aaPredicted RBP16.51■□□□□ 0.23
CPSF7-202ENST00000394888 C2CD6Q53TS8 623 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 EFCAB13Q8IY85 973 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 MCOLN2Q8IZK6 566 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 ART4Q93070 314 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 IWS1Q96ST2 819 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 SEPT11Q9NVA2 429 aaKnown RBP16.51■□□□□ 0.23
CPSF7-202ENST00000394888 FSCN2O14926 492 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 ZNF132P52740 706 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 C6orf89Q6UWU4 347 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 MAATS1Q7Z4T9 603 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 NIFKQ9BYG3 293 aaKnown RBP16.51■□□□□ 0.23
CPSF7-202ENST00000394888 WNT8AQ9H1J5 351 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 FAM114A2Q9NRY5 505 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 EVPLQ92817 2033 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 BRCA2P51587 3418 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 FAM187AA6NFU0 413 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 CNMDO75829 334 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 CENPCQ03188 943 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 ZNF252P-AS1Q0IIN9 211 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 EMC2Q15006 297 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 QPCTQ16769 361 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 SPRED3Q2MJR0 410 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 CYFIP1Q7L576 1253 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 NLRX1Q86UT6 975 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 BCAS4Q8TDM0 211 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 EPN3Q9H201 632 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms