RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 ERGIC2Q96RQ1 377 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 CARD9Q9H257 536 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 CDV3Q9UKY7 258 aaKnown RBP10.1□□□□□ -0.79
SNX1-202ENST00000380285 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNX1-202ENST00000380285 FAM170AA1A519 330 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 POTECB2RU33 542 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 H2AFXP16104 143 aaPredicted RBP10.1□□□□□ -0.79
SNX1-202ENST00000380285 ZNF200P98182 395 aaPredicted RBP10.1□□□□□ -0.79
SNX1-202ENST00000380285 NEUROG2Q9H2A3 272 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 ABCF3Q9NUQ8 709 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 LRRC14Q15048 493 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 KBTBD12Q3ZCT8 623 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 ANKRD40Q6AI12 368 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 RHPN2Q8IUC4 686 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 CCNYL1Q8N7R7 359 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 ZNF512BQ96KM6 892 aaPredicted RBP10.09□□□□□ -0.79
SNX1-202ENST00000380285 SLC13A1Q9BZW2 595 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 BTNL9Q6UXG8 535 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 VCPKMTQ9H867 229 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 CYP4F11Q9HBI6 524 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 NOD2Q9HC29 1040 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 TTC7AQ9ULT0 858 aaPredicted RBP10.09□□□□□ -0.79
SNX1-202ENST00000380285 ARAP3Q8WWN8 1544 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 SERPINI2O75830 405 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 GNAT1P11488 350 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 ZNF211Q13398 564 aaPredicted RBP10.09□□□□□ -0.79
SNX1-202ENST00000380285 TSTA3Q13630 321 aaPredicted RBP10.09□□□□□ -0.79
SNX1-202ENST00000380285 DUOXA2Q1HG44 320 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 MIGA2Q7L4E1 593 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 PLD3Q8IV08 490 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 SPICE1Q8N0Z3 855 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 SLC35G2Q8TBE7 412 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 KRT75O95678 551 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 ATICP31939 592 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 EFNA5P52803 228 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 PSMC5P62195 406 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 KIF22Q14807 665 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 ZBTB33Q86T24 672 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 TRIM69Q86WT6 500 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 RNF25Q96BH1 459 aaPredicted RBP10.09□□□□□ -0.79
SNX1-202ENST00000380285 DCPSQ96C86 337 aaKnown RBP10.09□□□□□ -0.79
SNX1-202ENST00000380285 ADGRA3Q8IWK6 1321 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 ENO1P06733 434 aaKnown RBP10.09□□□□□ -0.79
SNX1-202ENST00000380285 TMEM253P0C7T8 217 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 LLGL1Q15334 1064 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 SULF1Q8IWU6 871 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 ERP27Q96DN0 273 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 NPHS2Q9NP85 383 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 OLA1Q9NTK5 396 aaKnown RBP10.09□□□□□ -0.79
SNX1-202ENST00000380285 DDX28Q9NUL7 540 aaKnown RBP10.09□□□□□ -0.79
SNX1-202ENST00000380285 ITGB1BP2Q9UKP3 347 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 CCDC195A0A1B0GUA6 201 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 COPB2P35606 906 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 EIF3EP60228 445 aaKnown RBP10.09□□□□□ -0.79
SNX1-202ENST00000380285 NAA30Q147X3 362 aaPredicted RBP10.09□□□□□ -0.79
SNX1-202ENST00000380285 RWDD4Q6NW29 188 aaKnown RBP10.09□□□□□ -0.79
SNX1-202ENST00000380285 CYB5D1Q6P9G0 228 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 OR6B3Q8NGW1 331 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 ASAP3Q8TDY4 903 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 MLXIPLQ9NP71 852 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 NEU2Q9Y3R4 380 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 ADCY3O60266 1144 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 HUS1O60921 280 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 SERPINB1P30740 379 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 NUP107P57740 925 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 SCARA5Q6ZMJ2 495 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 HACD3Q9P035 362 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 GRID1Q9ULK0 1009 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 PNPLA6Q8IY17 1366 aa10.09□□□□□ -0.79
SNX1-202ENST00000380285 EMSYQ7Z589 1322 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 DPP9Q86TI2 863 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 GLYCTKQ8IVS8 523 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 HIC2Q96JB3 615 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 ZIM3Q96PE6 472 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 PAK5Q9P286 719 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 DNAJC6O75061 913 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 ATP5BP06576 529 aaKnown RBP10.08□□□□□ -0.8
SNX1-202ENST00000380285 SNRPAP09012 282 aaKnown RBP10.08□□□□□ -0.8
SNX1-202ENST00000380285 ELMSAN1Q6PJG2 1045 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 HORMAD1Q86X24 394 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 DCLRE1BQ9H816 532 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 IRAK4Q9NWZ3 460 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 CDYLQ9Y232 598 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 TMEM120BA0PK00 339 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 E5RI56 91 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 ACTR2P61160 394 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 ANGPTL8Q6UXH0 198 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 CDR2LQ86X02 465 aaPredicted RBP10.08□□□□□ -0.8
SNX1-202ENST00000380285 PPHLN1Q8NEY8 458 aaKnown RBP10.08□□□□□ -0.8
SNX1-202ENST00000380285 PIGOQ8TEQ8 1089 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 GCNAQ96QF7 691 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 PHF20Q9BVI0 1012 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 DENND3A2RUS2 1198 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 ZBTB41Q5SVQ8 909 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 MAGEB18Q96M61 343 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 EPAS1Q99814 870 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 ASCC2Q9H1I8 757 aaPredicted RBP10.08□□□□□ -0.8
SNX1-202ENST00000380285 EPS8L2Q9H6S3 715 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 TARBP1Q13395 1621 aaKnown RBP10.08□□□□□ -0.8
SNX1-202ENST00000380285 MTSS1O43312 755 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms