RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ATG7O95352 703 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 STAT5BP51692 787 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 Q3C1V9 767 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 RIOX2Q8IUF8 465 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 FAM76AQ8TAV0 307 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 PSPC1Q8WXF1 523 aaKnown RBP17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 PSD3Q9NYI0 1048 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 UMODL1Q5DID0 1318 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 SPOPO43791 374 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 GJB1P08034 283 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 SRGAP2CP0DJJ0 459 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 ICAM3P32942 547 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 RTP1P59025 263 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 CAPSQ13938 189 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 HSDL1Q3SXM5 330 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 ZDHHC14Q8IZN3 488 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 OR5B17Q8NGF7 314 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 FAM212AQ96EL1 285 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 CENPHQ9H3R5 247 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 DAAM1Q9Y4D1 1078 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 MYPNQ86TC9 1320 aa17.16■□□□□ 0.34
CNKSR1-202ENST00000374253 CCDC188H7C350 402 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 GRIN3BO60391 1043 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 VNN1O95497 513 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 ARL2P36404 184 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 TNFSF9P41273 254 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 MAATS1Q7Z4T9 603 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 USP37Q86T82 979 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 CDR2LQ86X02 465 aaPredicted RBP17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 TRAPPC12Q8WVT3 735 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 COPS5Q92905 334 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 C18orf8Q96DM3 657 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 CEP89Q96ST8 783 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 CARD9Q9H257 536 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 PYGMP11217 842 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 IQCKQ8N0W5 287 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 PRPF31Q8WWY3 499 aaKnown RBP17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 SH3GL2Q99962 352 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 ZSWIM1Q9BR11 485 aa17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 APOBEC3GQ9HC16 384 aaKnown RBP17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 ADARB2Q9NS39 739 aaKnown RBP17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 CNOT8Q9UFF9 292 aaKnown RBP17.15■□□□□ 0.34
CNKSR1-202ENST00000374253 CNMDO75829 334 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 GZMAP12544 262 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 ACTN2P35609 894 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 ATP1A2P50993 1020 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 CCDC125Q86Z20 511 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 FBXO16Q8IX29 292 aaPredicted RBP17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 TCHPQ9BT92 498 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 PLAAQ9Y263 795 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 C4BPAP04003 597 aaKnown RBP17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 NF2P35240 595 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 NAMPTP43490 491 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 NNTQ13423 1086 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 ZACNQ401N2 412 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 WDR44Q5JSH3 913 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 ALS2CLQ60I27 953 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 C11orf63Q6NUN7 778 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 LEKR1Q6ZMV7 388 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 C15orf39Q6ZRI6 1047 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 CCDC26Q8TAB7 109 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 VTI1AQ96AJ9 217 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 FHDC1Q9C0D6 1143 aaPredicted RBP17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 MCM3APO60318 1980 aa17.14■□□□□ 0.33
CNKSR1-202ENST00000374253 CCDC66A2RUB6 948 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 GTF2H1P32780 548 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 DR1Q01658 176 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 POU5F1Q01860 360 aaKnown RBP17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 PSMD6Q15008 389 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 TMEM270Q6UE05 265 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 UBL4BQ8N7F7 174 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 WHAMMQ8TF30 809 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 OTOFQ9HC10 1997 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 IGKV6D-21A0A0A0MT36 114 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 OPA1O60313 960 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 HSD17B3P37058 310 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 UAP1Q16222 522 aaPredicted RBP17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 CEP85LQ5SZL2 805 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 ACAD10Q6JQN1 1059 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 TMEM130Q8N3G9 435 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 UBLCP1Q8WVY7 318 aaPredicted RBP17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 CYFIP2Q96F07 1278 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 SLITRK6Q9H5Y7 841 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 ANAPC7Q9UJX3 599 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 UTP11Q9Y3A2 253 aaKnown RBP17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 PAPPA2Q9BXP8 1791 aa17.13■□□□□ 0.33
CNKSR1-202ENST00000374253 GJB6O95452 261 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 CYP1A2P05177 515 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 RRM1P23921 792 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 EDNRBP24530 442 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 IREB2P48200 963 aaKnown RBP17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 PEX5P50542 639 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 PTENP60484 403 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 OSTNP61366 133 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 GCNT1Q02742 428 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 CLEC16AQ2KHT3 1053 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 PPP1R16BQ96T49 567 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 NIFKQ9BYG3 293 aaKnown RBP17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 NRBP2Q9NSY0 501 aa17.12■□□□□ 0.33
CNKSR1-202ENST00000374253 GTF3C4Q9UKN8 822 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms