RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 SFR1Q86XK3 245 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 MAP4K3Q8IVH8 894 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 TNMDQ9H2S6 317 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 CHST7Q9NS84 486 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 CACNG4Q9UBN1 327 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 PPP1R37O75864 691 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 KCNE1P15382 129 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 HSP90AA2PQ14568 343 aaPredicted RBP21.9■■□□□ 1.1
TMEM53-205ENST00000372244 SLC10A6Q3KNW5 377 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 KIAA0319Q5VV43 1072 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 CNNM4Q6P4Q7 775 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 SLC39A4Q6P5W5 647 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 LEO1Q8WVC0 666 aaPredicted RBP21.9■■□□□ 1.1
TMEM53-205ENST00000372244 RABGGTAQ92696 567 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 CHAMP1Q96JM3 812 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 ZMAT2Q96NC0 199 aaKnown RBP21.9■■□□□ 1.1
TMEM53-205ENST00000372244 UHRF1Q96T88 793 aaPredicted RBP21.9■■□□□ 1.1
TMEM53-205ENST00000372244 GPR62Q9BZJ7 368 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 ANKFY1Q9P2R3 1169 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 ADAM28Q9UKQ2 775 aa21.9■■□□□ 1.1
TMEM53-205ENST00000372244 TCF20Q9UGU0 1960 aaKnown RBP21.89■■□□□ 1.1
TMEM53-205ENST00000372244 A0A0B4J269 797 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.89■■□□□ 1.09
TMEM53-205ENST00000372244 HNRNPDLO14979 420 aaKnown RBP21.89■■□□□ 1.09
TMEM53-205ENST00000372244 FAM189A1O60320 539 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 LIG4P49917 911 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 GPR65Q8IYL9 337 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 SMRP1Q8NCR6 262 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 BICD1Q96G01 975 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 SNX27Q96L92 541 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 LRRC27Q9C0I9 530 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 OLFML3Q9NRN5 406 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 CNTN3Q9P232 1028 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 CD207Q9UJ71 328 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 BARX2Q9UMQ3 279 aaPredicted RBP21.89■■□□□ 1.09
TMEM53-205ENST00000372244 ATP6V1DQ9Y5K8 247 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 STYXL1Q9Y6J8 313 aa21.89■■□□□ 1.09
TMEM53-205ENST00000372244 TDRD15B5MCY1 1934 aaKnown RBP21.88■■□□□ 1.09
TMEM53-205ENST00000372244 CASTOR2A6NHX0 329 aa21.88■■□□□ 1.09
TMEM53-205ENST00000372244 POLR2DO15514 142 aaKnown RBP21.88■■□□□ 1.09
TMEM53-205ENST00000372244 TADA2AO75478 443 aa21.88■■□□□ 1.09
TMEM53-205ENST00000372244 KRT85P78386 507 aa21.88■■□□□ 1.09
TMEM53-205ENST00000372244 HERC4Q5GLZ8 1057 aaPredicted RBP21.88■■□□□ 1.09
TMEM53-205ENST00000372244 GLRA4Q5JXX5 417 aa21.88■■□□□ 1.09
TMEM53-205ENST00000372244 STAMQ92783 540 aa21.88■■□□□ 1.09
TMEM53-205ENST00000372244 DHX58Q96C10 678 aa21.88■■□□□ 1.09
TMEM53-205ENST00000372244 NECAB3Q96P71 396 aaPredicted RBP21.88■■□□□ 1.09
TMEM53-205ENST00000372244 HERC2P3Q9BVR0 1158 aa21.88■■□□□ 1.09
TMEM53-205ENST00000372244 MRPL44Q9H9J2 332 aaKnown RBP21.88■■□□□ 1.09
TMEM53-205ENST00000372244 PLEKHA5Q9HAU0 1116 aa21.88■■□□□ 1.09
TMEM53-205ENST00000372244 MRPL17Q9NRX2 175 aaKnown RBP21.88■■□□□ 1.09
TMEM53-205ENST00000372244 HCFC2Q9Y5Z7 792 aa21.88■■□□□ 1.09
TMEM53-205ENST00000372244 CLTAP09496 248 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 IL9P15248 144 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 AMPD3Q01432 767 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 DSG1Q02413 1049 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 SMAD4Q13485 552 aaKnown RBP21.87■■□□□ 1.09
TMEM53-205ENST00000372244 SMAD2Q15796 467 aaKnown RBP21.87■■□□□ 1.09
TMEM53-205ENST00000372244 KYAT1Q16773 422 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 SEZ6Q53EL9 994 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 ADALQ6DHV7 355 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 FUT10Q6P4F1 479 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 SLC22A17Q8WUG5 538 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 HVCN1Q96D96 273 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 KLHL5Q96PQ7 755 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 TRIM9Q9C026 710 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 S1PR5Q9H228 398 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 PANK4Q9NVE7 773 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 FAM13BQ9NYF5 915 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 KCNH3Q9ULD8 1083 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 SSX2IPQ9Y2D8 614 aa21.87■■□□□ 1.09
TMEM53-205ENST00000372244 ANKRD63C9JTQ0 380 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 MBTPS2O43462 519 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 ADRB2P07550 413 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 CNPP09543 421 aaKnown RBP21.86■■□□□ 1.09
TMEM53-205ENST00000372244 HARSP12081 509 aaKnown RBP21.86■■□□□ 1.09
TMEM53-205ENST00000372244 IDEP14735 1019 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 CMA1P23946 247 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 SOX4Q06945 474 aaPredicted RBP21.86■■□□□ 1.09
TMEM53-205ENST00000372244 CLUL1Q15846 466 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 UPP1Q16831 310 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 USP41Q3LFD5 358 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 ANKRD54Q6NXT1 300 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 DCLRE1AQ6PJP8 1040 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 CD300LGQ6UXG3 332 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 SPATA32Q96LK8 384 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 C7orf25Q9BPX7 421 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 MAGEF1Q9HAY2 307 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 RXFP1Q9HBX9 757 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 SLC38A7Q9NVC3 462 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 TBC1D7Q9P0N9 293 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 FAM50BQ9Y247 325 aa21.86■■□□□ 1.09
TMEM53-205ENST00000372244 TTC26A0AVF1 554 aa21.85■■□□□ 1.09
TMEM53-205ENST00000372244 TMEM189-UBE2V1I3L0A0 370 aa21.85■■□□□ 1.09
TMEM53-205ENST00000372244 OGTO15294 1046 aa21.85■■□□□ 1.09
TMEM53-205ENST00000372244 KIF4AO95239 1232 aa21.85■■□□□ 1.09
TMEM53-205ENST00000372244 HOXB8P17481 243 aaPredicted RBP21.85■■□□□ 1.09
TMEM53-205ENST00000372244 IGFBP6P24592 240 aaPredicted RBP21.85■■□□□ 1.09
TMEM53-205ENST00000372244 KCNA1Q09470 495 aa21.85■■□□□ 1.09
TMEM53-205ENST00000372244 LLGL2Q6P1M3 1020 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms