RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 CRACR2AQ9BSW2 395 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 CCDC85CA6NKD9 419 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 MEFVO15553 781 aaPredicted RBP11.87□□□□□ -0.51
BRCC3-204ENST00000369462 PARNO95453 639 aaKnown RBP11.87□□□□□ -0.51
BRCC3-204ENST00000369462 FMO5P49326 533 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 CBWD6Q4V339 395 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 CBWD3Q5JTY5 395 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 CBWD5Q5RIA9 395 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 SEPT8Q92599 483 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 PARP2Q9UGN5 583 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 A0A0U1RQF3 1178 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 TTC26A0AVF1 554 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 LACTBL1A8MY62 500 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 KIAA0355O15063 1070 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 RECQL4O94761 1208 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 TIMP1P01033 207 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 YARSP54577 528 aaKnown RBP11.87□□□□□ -0.51
BRCC3-204ENST00000369462 RTN4RL1Q86UN2 441 aaPredicted RBP11.87□□□□□ -0.51
BRCC3-204ENST00000369462 DRC7Q8IY82 874 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 RNF169Q8NCN4 708 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 PTPRJQ12913 1337 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 MEIS3P2A8K0S8 358 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 HOXD11P31277 338 aaPredicted RBP11.86□□□□□ -0.51
BRCC3-204ENST00000369462 MCCD1P59942 119 aaPredicted RBP11.86□□□□□ -0.51
BRCC3-204ENST00000369462 SYCP1Q15431 976 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 ZNF516Q92618 1163 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 TRAIPQ9BWF2 469 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 FTHL17Q9BXU8 183 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 TMEM117Q9H0C3 514 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 RNF19AQ9NV58 838 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 KLK14Q9P0G3 267 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 IL18RAPO95256 599 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 CXCL10P02778 98 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 MXI1P50539 228 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 CLDN10P78369 228 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 TFAMQ00059 246 aaKnown RBP11.86□□□□□ -0.51
BRCC3-204ENST00000369462 POU5F1Q01860 360 aaKnown RBP11.86□□□□□ -0.51
BRCC3-204ENST00000369462 SURF1Q15526 300 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 SV2AQ7L0J3 742 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 SPC24Q8NBT2 197 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 OR5B17Q8NGF7 314 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 LINC01599Q8WXQ3 324 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 LPPQ93052 612 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 CGRRF1Q99675 332 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 CXCL16Q9H2A7 254 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 RGS18Q9NS28 235 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 PRKAG2Q9UGJ0 569 aa11.86□□□□□ -0.51
BRCC3-204ENST00000369462 SCN5AQ14524 2016 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 STX10O60499 249 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 ZNF623O75123 536 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 CSF2RAP15509 400 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 RAB27AP51159 221 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 ENPEPQ07075 957 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 KRT39Q6A163 491 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 SLC24A5Q71RS6 500 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 VSTM4Q8IW00 320 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 EFCAB13Q8IY85 973 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 HACE1Q8IYU2 909 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 PCMTD1Q96MG8 357 aaPredicted RBP11.85□□□□□ -0.51
BRCC3-204ENST00000369462 ERGIC2Q96RQ1 377 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 TSPYL2Q9H2G4 693 aaPredicted RBP11.85□□□□□ -0.51
BRCC3-204ENST00000369462 ASB7Q9H672 318 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 TMEM8AQ9HCN3 771 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 C9IYK1 514 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 NFICP08651 508 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 ITGA4P13612 1032 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 PBX1P40424 430 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 KLK7P49862 253 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 MYL7Q01449 175 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 TCTN1Q2MV58 587 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 JADE1Q6IE81 842 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 TMC6Q7Z403 805 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 WDR49Q8IV35 697 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 C7orf61Q8IZ16 206 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 APBB2Q92870 758 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 SNX27Q96L92 541 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 MTMR12Q9C0I1 747 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 PLEKHA5Q9HAU0 1116 aa11.85□□□□□ -0.51
BRCC3-204ENST00000369462 ENPP3O14638 875 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 ATF7P17544 494 aaPredicted RBP11.84□□□□□ -0.51
BRCC3-204ENST00000369462 GTF2H1P32780 548 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 KCNMA1Q12791 1236 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 CETN1Q12798 172 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 BIRC3Q13489 604 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 EXOC3L4Q17RC7 722 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 DUOXA2Q1HG44 320 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 GLRA4Q5JXX5 417 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 SPECC1LQ69YQ0 1117 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 MFSD5Q6N075 450 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 GBP6Q6ZN66 633 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 MRPL10Q7Z7H8 261 aaKnown RBP11.84□□□□□ -0.51
BRCC3-204ENST00000369462 ECHDC2Q86YB7 292 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 ZFP42Q96MM3 310 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 ZMAT2Q96NC0 199 aaKnown RBP11.84□□□□□ -0.51
BRCC3-204ENST00000369462 GCNT4Q9P109 453 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 A0A1W2PQC6 194 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 N4BP1O75113 896 aaKnown RBP11.84□□□□□ -0.51
BRCC3-204ENST00000369462 C4BPAP04003 597 aaKnown RBP11.84□□□□□ -0.51
BRCC3-204ENST00000369462 TMEM191BP0C7N4 346 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 SKIP12755 728 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms