RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CR1LQ2VPA4 569 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 FAM209AQ5JX71 171 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 TEPPQ6URK8 271 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 GADL1Q6ZQY3 521 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 FRMD5Q7Z6J6 570 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 DZIP1Q86YF9 867 aaKnown RBP6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 FAM26EQ8N5C1 309 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 ZSWIM2Q8NEG5 633 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 CLIC6Q96NY7 704 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 PARK7Q99497 189 aaKnown RBP6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 DNAJC2Q99543 621 aaKnown RBP6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 MEIS3Q99687 375 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 DHRS4Q9BTZ2 278 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 XYLT2Q9H1B5 865 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 ABCF2Q9UG63 623 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 ZHX2Q9Y6X8 837 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 PHIPQ8WWQ0 1821 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 ATRNL1Q5VV63 1379 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 GAKO14976 1311 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 ATAD5Q96QE3 1844 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 CCDC163A0A0D9SF12 145 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 A0A0G2JLL6 359 aaPredicted RBP6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 DDTLA6NHG4 134 aaPredicted RBP6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 CXCL11O14625 94 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 EFCAB14O75071 495 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 ENTPD3O75355 529 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 C6orf222P0C671 652 aaPredicted RBP6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 FAM153BP0C7A2 387 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 CCL5P13501 91 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 RPL13P26373 211 aaKnown RBP6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 HOXD10P28358 340 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 BTDP43251 543 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 SCYL3Q8IZE3 742 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 ZGPATQ8N5A5 531 aaKnown RBP6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 FEZF2Q8TBJ5 459 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 THAP3Q8WTV1 239 aaPredicted RBP6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 KCNJ15Q99712 375 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 SPATA25Q9BR10 227 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 IDI2Q9BXS1 227 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 API5Q9BZZ5 524 aaKnown RBP6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 IPPKQ9H8X2 491 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 DDX4Q9NQI0 724 aaKnown RBP6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 HSPBP1Q9NZL4 362 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 DSEQ9UL01 958 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 GABRQQ9UN88 632 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 TRAF6Q9Y4K3 522 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 DOCK3Q8IZD9 2030 aa6.35□□□□□ -1.39
RNU4-4P-201ENST00000364588 RFX7Q2KHR2 1363 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 A0A1B0GTL3 188 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 A0A1B0GUL7 405 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 OTOL1A6NHN0 477 aaPredicted RBP6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 TRIM75PA6NK02 468 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 WNT9AO14904 365 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 MECOMQ03112 1051 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 TFCP2Q12800 502 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 C2orf27AQ580R0 203 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 FAM26FQ5R3K3 315 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 FOXB2Q5VYV0 432 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 FASTKD5Q7L8L6 764 aaKnown RBP6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 PRRT2Q7Z6L0 340 aaPredicted RBP6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 TRMT2AQ8IZ69 625 aaKnown RBP6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 SYT8Q8NBV8 401 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 SMCR8Q8TEV9 937 aaPredicted RBP6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 UBXN4Q92575 508 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 NEUROD6Q96NK8 337 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 DNAJC7Q99615 494 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 SPATA6Q9NWH7 488 aaPredicted RBP6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 AFG3L2Q9Y4W6 797 aa6.34□□□□□ -1.39
RNU4-4P-201ENST00000364588 ADAMTS20P59510 1910 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 MROH7-TTC4A0A0A0MT08 1334 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 ARVCFO00192 962 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 TNPO2O14787 897 aaKnown RBP6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 SLC27A2O14975 620 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 GSTA4O15217 222 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 CTNND1O60716 968 aaKnown RBP6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 GJB1P08034 283 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 FLT3LGP49771 235 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 UBXN2AP68543 259 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 GUCY1A3Q02108 690 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 TUSC3Q13454 348 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 MVPQ14764 893 aaKnown RBP6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 FAM47CQ5HY64 1035 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 TREML2Q5T2D2 321 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 GORABQ5T7V8 394 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 NT5DC1Q5TFE4 455 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 SPTY2D1Q68D10 685 aaPredicted RBP6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 VASNQ6EMK4 673 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 KCTD1Q719H9 257 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 ADGRG2Q8IZP9 1017 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 ANKRD13CQ8N6S4 541 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 ZNF384Q8TF68 577 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 KISS1RQ969F8 398 aaPredicted RBP6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 DRC1Q96MC2 740 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 SFMBT1Q9UHJ3 866 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 HDAC5Q9UQL6 1122 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 TNNQ9UQP3 1299 aa6.33□□□□□ -1.4
RNU4-4P-201ENST00000364588 MYO5AQ9Y4I1 1855 aaKnown RBP6.32□□□□□ -1.4
RNU4-4P-201ENST00000364588 PDS5AQ29RF7 1337 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms