RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 EPN1Q9Y6I3 576 aaPredicted RBP25.08■■□□□ 1.61
SDF4-202ENST00000360001 ANK1P16157 1881 aa25.08■■□□□ 1.6
SDF4-202ENST00000360001 RFX1P22670 979 aa25.07■■□□□ 1.6
SDF4-202ENST00000360001 OSTNP61366 133 aa25.07■■□□□ 1.6
SDF4-202ENST00000360001 TDRD10Q5VZ19 366 aaKnown RBP25.07■■□□□ 1.6
SDF4-202ENST00000360001 ARHGEF19Q8IW93 802 aa25.07■■□□□ 1.6
SDF4-202ENST00000360001 STK33Q9BYT3 514 aa25.07■■□□□ 1.6
SDF4-202ENST00000360001 MOXD2PA6NHM9 499 aa25.07■■□□□ 1.6
SDF4-202ENST00000360001 NDUFA10O95299 355 aa25.07■■□□□ 1.6
SDF4-202ENST00000360001 CCDC170Q8IYT3 715 aa25.07■■□□□ 1.6
SDF4-202ENST00000360001 OR5B17Q8NGF7 314 aa25.07■■□□□ 1.6
SDF4-202ENST00000360001 TSEN34Q9BSV6 310 aaKnown RBP25.07■■□□□ 1.6
SDF4-202ENST00000360001 CELF4Q9BZC1 486 aaKnown RBP25.07■■□□□ 1.6
SDF4-202ENST00000360001 PTPN22Q9Y2R2 807 aa25.07■■□□□ 1.6
SDF4-202ENST00000360001 STAG3L1P0CL83 205 aa25.06■■□□□ 1.6
SDF4-202ENST00000360001 MRPS6P82932 125 aaKnown RBP25.06■■□□□ 1.6
SDF4-202ENST00000360001 ITGA7Q13683 1181 aa25.06■■□□□ 1.6
SDF4-202ENST00000360001 WDR49Q8IV35 697 aa25.06■■□□□ 1.6
SDF4-202ENST00000360001 REXO1L1PQ8IX06 675 aa25.06■■□□□ 1.6
SDF4-202ENST00000360001 GPR88Q9GZN0 384 aa25.06■■□□□ 1.6
SDF4-202ENST00000360001 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.06■■□□□ 1.63e-7■■■■□ 22.6
SDF4-202ENST00000360001 CCP110O43303 1012 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 ZSCAN12O43309 604 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 SERPING1P05155 500 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 CLTAP09496 248 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 CCDC175P0C221 793 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 NCBP1Q09161 790 aaKnown RBP25.05■■□□□ 1.6
SDF4-202ENST00000360001 SURF1Q15526 300 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 IRF2BP2Q7Z5L9 587 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 ACRBPQ8NEB7 543 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 FAM212AQ96EL1 285 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 ADPGKQ9BRR6 497 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 F8VZ95 297 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 MEFVO15553 781 aaPredicted RBP25.05■■□□□ 1.6
SDF4-202ENST00000360001 VNN1O95497 513 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 CXCL8P10145 99 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 DRAP1Q14919 205 aaPredicted RBP25.05■■□□□ 1.6
SDF4-202ENST00000360001 ASIC2Q16515 512 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 RPAINQ86UA6 219 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 RSPH3Q86UC2 560 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 VTI1AQ96AJ9 217 aa25.05■■□□□ 1.6
SDF4-202ENST00000360001 RPF1Q9H9Y2 349 aaKnown RBP25.05■■□□□ 1.6
SDF4-202ENST00000360001 UBE2TQ9NPD8 197 aaPredicted RBP25.05■■□□□ 1.6
SDF4-202ENST00000360001 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.05■■□□□ 1.62e-7■■■■■ 52.5
SDF4-202ENST00000360001 CYLC1P35663 651 aaPredicted RBP25.04■■□□□ 1.6
SDF4-202ENST00000360001 EIF4A3P38919 411 aaKnown RBP25.04■■□□□ 1.6
SDF4-202ENST00000360001 POU5F1Q01860 360 aaKnown RBP25.04■■□□□ 1.6
SDF4-202ENST00000360001 ARID5AQ03989 594 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 MAPK8IP2Q13387 824 aaPredicted RBP25.04■■□□□ 1.6
SDF4-202ENST00000360001 PTGISQ16647 500 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 KYAT1Q16773 422 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 SLC9C1Q4G0N8 1177 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 CCDC42Q96M95 316 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 REXO2Q9Y3B8 237 aaKnown RBP25.04■■□□□ 1.6
SDF4-202ENST00000360001 CDY2AQ9Y6F7 541 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 B4GALT4O60513 344 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 HLA-DRAP01903 254 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 PNMA6AP0CW24 399 aaPredicted RBP25.04■■□□□ 1.6
SDF4-202ENST00000360001 AXLP30530 894 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 STAT1P42224 750 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 AP3M2P53677 418 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 BIRC3Q13489 604 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 DCAF4L1Q3SXM0 396 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 NOTUMQ6P988 496 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 SLC27A1Q6PCB7 646 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 GLT1D1Q96MS3 346 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 UNC93B1Q9H1C4 597 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 TRPV2Q9Y5S1 764 aa25.04■■□□□ 1.6
SDF4-202ENST00000360001 SSU72P8A0A1W2PR75 194 aa25.03■■□□□ 1.6
SDF4-202ENST00000360001 RBAK-RBAKDNI3L0D1 243 aa25.03■■□□□ 1.6
SDF4-202ENST00000360001 IL18RAPO95256 599 aa25.03■■□□□ 1.6
SDF4-202ENST00000360001 PTPN11Q06124 597 aaPredicted RBP25.03■■□□□ 1.6
SDF4-202ENST00000360001 ARHGAP44Q17R89 818 aa25.03■■□□□ 1.6
SDF4-202ENST00000360001 ASTE1Q2TB18 679 aaPredicted RBP25.03■■□□□ 1.6
SDF4-202ENST00000360001 EFCAB13Q8IY85 973 aa25.03■■□□□ 1.6
SDF4-202ENST00000360001 HELQQ8TDG4 1101 aa25.03■■□□□ 1.6
SDF4-202ENST00000360001 EIF3CLB5ME19 914 aaKnown RBP25.02■■□□□ 1.6
SDF4-202ENST00000360001 ZC3H11AO75152 810 aaKnown RBP eCLIP25.02■■□□□ 1.62e-6■□□□□ 8.9
SDF4-202ENST00000360001 NPTXRO95502 500 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 RPLP2P05387 115 aaKnown RBP25.02■■□□□ 1.6
SDF4-202ENST00000360001 SOX5P35711 763 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 NYAP1Q6ZVC0 841 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 KAT5Q92993 513 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 C16orf45Q96MC5 204 aaPredicted RBP25.02■■□□□ 1.6
SDF4-202ENST00000360001 NT5C1BQ96P26 610 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 EIF3CQ99613 913 aaKnown RBP25.02■■□□□ 1.6
SDF4-202ENST00000360001 PI4K2AQ9BTU6 479 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 M0QZ92 97 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 GRM5P41594 1212 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 PRKCIP41743 596 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 PIK3CAP42336 1068 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 C1QTNF8P60827 252 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 MGAT3Q09327 533 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 KLHL30Q0D2K2 578 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 TDRD12Q587J7 1177 aaKnown RBP25.02■■□□□ 1.6
SDF4-202ENST00000360001 ARRDC4Q8NCT1 418 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 ELMO3Q96BJ8 720 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 KREMEN1Q96MU8 473 aa25.02■■□□□ 1.6
SDF4-202ENST00000360001 EIF2AQ9BY44 585 aaKnown RBP25.02■■□□□ 1.6
SDF4-202ENST00000360001 MTMR12Q9C0I1 747 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms