RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 GSNP06396 782 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 SERPINB3P29508 390 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 PHKA2P46019 1235 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 RNPC3Q96LT9 517 aaKnown RBP16.9■□□□□ 0.3
COL18A1-203ENST00000359759 ZNF556Q9HAH1 456 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 ZFATQ9P243 1243 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 MORC2Q9Y6X9 1032 aaPredicted RBP16.9■□□□□ 0.3
COL18A1-203ENST00000359759 KIF21AQ7Z4S6 1674 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 EMSYQ7Z589 1322 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 SRP72O76094 671 aaKnown RBP16.9■□□□□ 0.3
COL18A1-203ENST00000359759 DONSONQ9NYP3 566 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 KIF1CO43896 1103 aaKnown RBP16.9■□□□□ 0.3
COL18A1-203ENST00000359759 MRPL1Q9BYD6 325 aaKnown RBP16.9■□□□□ 0.3
COL18A1-203ENST00000359759 A8MXQ7 604 aa16.89■□□□□ 0.3
COL18A1-203ENST00000359759 NNMTP40261 264 aa16.89■□□□□ 0.3
COL18A1-203ENST00000359759 ZNF235Q14590 738 aa16.89■□□□□ 0.3
COL18A1-203ENST00000359759 VPS50Q96JG6 964 aa16.89■□□□□ 0.3
COL18A1-203ENST00000359759 AGBL1Q96MI9 1066 aa16.89■□□□□ 0.3
COL18A1-203ENST00000359759 SMARCAL1Q9NZC9 954 aa16.89■□□□□ 0.3
COL18A1-203ENST00000359759 TSPOAP1O95153 1857 aa16.89■□□□□ 0.29
COL18A1-203ENST00000359759 MYBL1P10243 752 aa16.89■□□□□ 0.29
COL18A1-203ENST00000359759 RC3H1Q5TC82 1133 aaKnown RBP16.89■□□□□ 0.29
COL18A1-203ENST00000359759 LAYNQ6UX15 382 aa16.89■□□□□ 0.29
COL18A1-203ENST00000359759 SRLQ86TD4 932 aa16.89■□□□□ 0.29
COL18A1-203ENST00000359759 CPA5Q8WXQ8 436 aa16.89■□□□□ 0.29
COL18A1-203ENST00000359759 NFKBIL1Q9UBC1 381 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-203ENST00000359759 LIMA1Q9UHB6 759 aaKnown RBP16.89■□□□□ 0.29
COL18A1-203ENST00000359759 STAP1Q9ULZ2 295 aa16.89■□□□□ 0.29
COL18A1-203ENST00000359759 TBXAS1P24557 533 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-203ENST00000359759 HORMAD1Q86X24 394 aa16.89■□□□□ 0.29
COL18A1-203ENST00000359759 NFIBO00712 420 aa16.89■□□□□ 0.29
COL18A1-203ENST00000359759 MTM1Q13496 603 aa16.89■□□□□ 0.29
COL18A1-203ENST00000359759 ADCK2Q7Z695 626 aa16.89■□□□□ 0.29
COL18A1-203ENST00000359759 XPO7Q9UIA9 1087 aaKnown RBP16.89■□□□□ 0.29
COL18A1-203ENST00000359759 PFKFB3Q16875 520 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-203ENST00000359759 SYNDIG1Q9H7V2 258 aa16.89■□□□□ 0.29
COL18A1-203ENST00000359759 GABBR1Q9UBS5 961 aa16.89■□□□□ 0.29
COL18A1-203ENST00000359759 NPC1L1Q9UHC9 1359 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 MCAMP43121 646 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 NLRP10Q86W26 655 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 SPATA4Q8NEY3 305 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 PLEKHF1Q96S99 279 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 CCT7Q99832 543 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 OLFML3Q9NRN5 406 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 PAIP2BQ9ULR5 123 aaKnown RBP16.88■□□□□ 0.29
COL18A1-203ENST00000359759 FAM32AQ9Y421 112 aaKnown RBP16.88■□□□□ 0.29
COL18A1-203ENST00000359759 TBX22Q9Y458 520 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 PTPRTO14522 1441 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 UNC13AQ9UPW8 1703 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 LINC00854A0A1B0GVQ3 168 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 STAG2Q8N3U4 1231 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 BPIFA3Q9BQP9 254 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 KRT87PA6NCN2 255 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 ASMTLO95671 621 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 TCF3P15923 654 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 CPA2P48052 419 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 KLC1Q07866 573 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 DHX34Q14147 1143 aaKnown RBP16.88■□□□□ 0.29
COL18A1-203ENST00000359759 SYTL3Q4VX76 610 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 URGCPQ8TCY9 931 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 HPS3Q969F9 1004 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 CALR3Q96L12 384 aaKnown RBP16.88■□□□□ 0.29
COL18A1-203ENST00000359759 OSBPL10Q9BXB5 764 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 TOPORSQ9NS56 1045 aaPredicted RBP16.88■□□□□ 0.29
COL18A1-203ENST00000359759 TRIM10Q9UDY6 481 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 SUPT3HB4E1H0 165 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 ZBTB5O15062 677 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 PTPN12Q05209 780 aaKnown RBP16.88■□□□□ 0.29
COL18A1-203ENST00000359759 FMR1NBQ8N0W7 255 aaPredicted RBP16.88■□□□□ 0.29
COL18A1-203ENST00000359759 KIAA1586Q9HCI6 787 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 LCMT1Q9UIC8 334 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 STX3Q13277 289 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 SLC30A9Q6PML9 568 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 RIN3Q8TB24 985 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 DCAF4Q8WV16 495 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 SEC16BQ96JE7 1060 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 TASP1Q9H6P5 420 aa16.88■□□□□ 0.29
COL18A1-203ENST00000359759 TSC22D2O75157 780 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 GUCA1CO95843 209 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 SERPINB4P48594 390 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 PCSK7Q16549 785 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 SGO1Q5FBB7 561 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 FAM196AQ6ZSG2 479 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 CCDC103Q8IW40 242 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 AGPAT1Q99943 283 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 BBS2Q9BXC9 721 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 GPBP1L1Q9HC44 474 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-203ENST00000359759 H2AFY2Q9P0M6 372 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-203ENST00000359759 DLGAP3O95886 979 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 LIFRP42702 1097 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 TMEM245Q9H330 911 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 ABT1Q9ULW3 272 aaKnown RBP16.87■□□□□ 0.29
COL18A1-203ENST00000359759 PITPNM2Q9BZ72 1349 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 APRTP07741 180 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 ATP6V1B1P15313 513 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 C16orf89Q6UX73 402 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 PRPF39Q86UA1 669 aaKnown RBP16.87■□□□□ 0.29
COL18A1-203ENST00000359759 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL18A1-203ENST00000359759 RIN2Q8WYP3 895 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-203ENST00000359759 DCUN1D1Q96GG9 259 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms