RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 DEUP1Q05D60 604 aa18.09■□□□□ 0.49
TRAPPC11-201ENST00000334690 KRT80Q6KB66 452 aa18.09■□□□□ 0.49
TRAPPC11-201ENST00000334690 RBM15Q96T37 977 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRAPPC11-201ENST00000334690 ARL2BPQ9Y2Y0 163 aa18.09■□□□□ 0.49
TRAPPC11-201ENST00000334690 AP5Z1O43299 807 aa18.09■□□□□ 0.49
TRAPPC11-201ENST00000334690 IRAK1P51617 712 aa18.09■□□□□ 0.49
TRAPPC11-201ENST00000334690 COPS2P61201 443 aa18.09■□□□□ 0.49
TRAPPC11-201ENST00000334690 STILQ15468 1287 aa18.09■□□□□ 0.49
TRAPPC11-201ENST00000334690 TKFCQ3LXA3 575 aa18.09■□□□□ 0.49
TRAPPC11-201ENST00000334690 HP1BP3Q5SSJ5 553 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC11-201ENST00000334690 NUDCD3Q8IVD9 361 aa18.09■□□□□ 0.49
TRAPPC11-201ENST00000334690 SGSM3Q96HU1 749 aa18.09■□□□□ 0.49
TRAPPC11-201ENST00000334690 ADGRB2O60241 1585 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 C19orf81C9J6K1 198 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 H0Y3Z8 333 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 ST3GAL1Q11201 340 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 MTMR2Q13614 643 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 NCOA4Q13772 614 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 DHX35Q9H5Z1 703 aaKnown RBP18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 FAF1Q9UNN5 650 aaPredicted RBP18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 A0A087X0T9 212 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 SLC37A4O43826 429 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 FAM228BP0C875 321 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 KRT10P13645 584 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 LSP1P33241 339 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 ACOT2P49753 483 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 EFHC2Q5JST6 749 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 SPATA21Q7Z572 469 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 ZIM3Q96PE6 472 aa18.08■□□□□ 0.49
TRAPPC11-201ENST00000334690 A8MXQ7 604 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 COMTP21964 271 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 XPAP23025 273 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 EIF3EP60228 445 aaKnown RBP18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 SGSM1Q2NKQ1 1148 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 ACAD11Q709F0 780 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 THEM5Q8N1Q8 247 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 ZNF473Q8WTR7 871 aaKnown RBP18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 SEPT1Q8WYJ6 367 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 ROPN1BQ9BZX4 212 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 TRABDQ9H4I3 376 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 ROPN1Q9HAT0 212 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 ASB14A6NK59 587 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 EPHB1P54762 984 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 PIGHQ14442 188 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 AP1ARQ63HQ0 302 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 ITPRIPL1Q6GPH6 555 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 RBBP8NLQ8NC74 664 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 FUT8Q9BYC5 575 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 SMARCAL1Q9NZC9 954 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 ZNF70Q9UC06 446 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 VWDEQ8N2E2 1590 aa18.08■□□□□ 0.48
TRAPPC11-201ENST00000334690 ZNF677Q86XU0 584 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 ALKBH8Q96BT7 664 aaKnown RBP18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 ZNF560Q96MR9 790 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 OSBPL8Q9BZF1 889 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 PPARGP37231 505 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 MAGEB5Q9BZ81 275 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 C17orf75Q9HAS0 396 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 AGPAT3Q9NRZ7 376 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 TRIM33Q9UPN9 1127 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 MEGF6O75095 1541 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 CCDC22O60826 627 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 CHRNA5P30532 468 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 PAPD7Q5XG87 772 aaKnown RBP18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 RDM1Q8NG50 284 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 FAM129AQ9BZQ8 928 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 GTF3C4Q9UKN8 822 aa18.07■□□□□ 0.48
TRAPPC11-201ENST00000334690 H3BRJ5 948 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 KLRK1P26718 216 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 SPATA31D1Q6ZQQ2 1576 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 TCP11X1B4DZS4 312 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 PI4K2BG5E9Z4 385 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 SLC4A1P02730 911 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 MUTP22033 750 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 LRRC31Q6UY01 552 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 ZC3H18Q86VM9 953 aaKnown RBP18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 PARP9Q8IXQ6 854 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 ZNF710Q8N1W2 664 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 KIF12Q96FN5 646 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 TNIP3Q96KP6 325 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 XPO6Q96QU8 1125 aaKnown RBP18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 FSD1LQ9BXM9 530 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 L1RE1Q9UN81 338 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 SPATA31A5Q5VU36 1347 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 SPATA31A7Q8IWB4 1347 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 IGSF9BQ9UPX0 1349 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 HNRNPCL1O60812 293 aaKnown RBP18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 PLEKP08567 350 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 PKN1Q16512 942 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 RSBN1LQ6PCB5 846 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 RYBPQ8N488 228 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 CPA5Q8WXQ8 436 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 KLC4Q9NSK0 619 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 ARPP19P56211 112 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 ZNF668Q96K58 619 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 BTBD6Q96KE9 485 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 MMP19Q99542 508 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 KCNH7Q9NS40 1196 aa18.06■□□□□ 0.48
TRAPPC11-201ENST00000334690 GNGT2O14610 69 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 MSH4O15457 936 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms