RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 SLFN12Q8IYM2 578 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 ERMNQ8TAM6 284 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 SCFD2Q8WU76 684 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 MAGOHBQ96A72 148 aaKnown RBP11.09□□□□□ -0.63
ABCF1-201ENST00000326195 NUCKS1Q9H1E3 243 aaKnown RBP11.09□□□□□ -0.63
ABCF1-201ENST00000326195 LMCD1Q9NZU5 365 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 DNM3Q9UQ16 869 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 UBIAD1Q9Y5Z9 338 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 MYADML2A6NDP7 307 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 SLC15A5A6NIM6 579 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 SRRM3A6NNA2 597 aaPredicted RBP11.09□□□□□ -0.63
ABCF1-201ENST00000326195 RAD51CO43502 376 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 FESP07332 822 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 EIF4A3P38919 411 aaKnown RBP11.09□□□□□ -0.63
ABCF1-201ENST00000326195 ZNF792Q3KQV3 632 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 VWA3BQ502W6 1294 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 TTI2Q6NXR4 508 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 SLC30A9Q6PML9 568 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 CDR2LQ86X02 465 aaPredicted RBP11.09□□□□□ -0.63
ABCF1-201ENST00000326195 KIF2BQ8N4N8 673 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 RUBCNQ92622 972 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 DDX12PQ92771 950 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 TMEM143Q96AN5 459 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 AP5M1Q9H0R1 490 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 IKZF4Q9H2S9 585 aa11.09□□□□□ -0.63
ABCF1-201ENST00000326195 FAM170AA1A519 330 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 ARHGEF35A5YM69 484 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 CCDC169A6NNP5 214 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 GHRP10912 638 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 PAPOLAP51003 745 aaKnown RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 PPP2R2AP63151 447 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 NAALADL2Q58DX5 795 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 KLHL7Q8IXQ5 586 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 DRAXINQ8NBI3 349 aaPredicted RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 MMTAG2Q9BU76 263 aaKnown RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 PAPOLBQ9NRJ5 636 aaKnown RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 ABCF3Q9NUQ8 709 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 GJD2Q9UKL4 321 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 TCP1P17987 556 aaKnown RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 HSPA9P38646 679 aaKnown RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 CTCFP49711 727 aaPredicted RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 KIF11P52732 1056 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 CWF19L1Q69YN2 538 aaKnown RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 UNC13DQ70J99 1090 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 IQCDQ96DY2 449 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 NOX5Q96PH1 765 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.08□□□□□ -0.643e-9■■■■■ 68.1
ABCF1-201ENST00000326195 SEPT11Q9NVA2 429 aaKnown RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 NOP53Q9NZM5 478 aaKnown RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 SRRDQ9UH36 339 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 UNCXA6NJT0 531 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 CETN3O15182 167 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 INHAP05111 366 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 SRGAP2CP0DJJ0 459 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 STAT5BP51692 787 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 ZNF200P98182 395 aaPredicted RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 GRB10Q13322 594 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 ZNF268Q14587 947 aaPredicted RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 TLK2Q86UE8 772 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 C1orf131Q8NDD1 294 aaKnown RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 DNERQ8NFT8 737 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 INPP4AQ96PE3 977 aaPredicted RBP11.08□□□□□ -0.64
ABCF1-201ENST00000326195 EPAS1Q99814 870 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 C7orf25Q9BPX7 421 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 NT5C3AQ9H0P0 336 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 ABHD16BQ9H3Z7 469 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 PLCB1Q9NQ66 1216 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 PCDHA10Q9Y5I2 948 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 PHIPQ8WWQ0 1821 aa11.08□□□□□ -0.64
ABCF1-201ENST00000326195 EVI5O60447 810 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 TBCAO75347 108 aaKnown RBP11.07□□□□□ -0.64
ABCF1-201ENST00000326195 SLITRK3O94933 977 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 PLA2G4BP0C869 781 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 HOXD10P28358 340 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 GRK4P32298 578 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 CTNNA1P35221 906 aaKnown RBP11.07□□□□□ -0.64
ABCF1-201ENST00000326195 POLR2FP61218 127 aaKnown RBP11.07□□□□□ -0.64
ABCF1-201ENST00000326195 FKBP3Q00688 224 aaKnown RBP11.07□□□□□ -0.64
ABCF1-201ENST00000326195 RIPK1Q13546 671 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 HLTFQ14527 1009 aaKnown RBP eCLIP11.07□□□□□ -0.645e-6■□□□□ 8.8
ABCF1-201ENST00000326195 DCAF17Q5H9S7 520 aaPredicted RBP11.07□□□□□ -0.64
ABCF1-201ENST00000326195 ANKRD20A2Q5SQ80 823 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 ANKRD20A1Q5TYW2 823 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 SFMBT2Q5VUG0 894 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 ANKRD20A3Q5VUR7 823 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 GLIS3Q8NEA6 775 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 PNMA5Q96PV4 448 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 APBA2Q99767 749 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 LSM14BQ9BX40 385 aaKnown RBP11.07□□□□□ -0.64
ABCF1-201ENST00000326195 MYMKA6NI61 221 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 PSMD10O75832 226 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 FTCDO95954 541 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 CTSHP09668 335 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 KCNA2P16389 499 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 PPP1R15BQ5SWA1 713 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 TRIM68Q6AZZ1 485 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 VPS36Q86VN1 386 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 FAM20AQ96MK3 541 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 RNPEPQ9H4A4 650 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 ZNF302Q9NR11 478 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms