RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 DALRD3Q5D0E6 543 aaKnown RBP12.71□□□□□ -0.38
PCF11-201ENST00000298281 NUGGCQ68CJ6 796 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 KDELC2Q7Z4H8 507 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 NLRP10Q86W26 655 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 TUBGCP3Q96CW5 907 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 PAGE5Q96GU1 130 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 COQ6Q9Y2Z9 468 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 ENO2P09104 434 aaPredicted RBP12.71□□□□□ -0.38
PCF11-201ENST00000298281 IL10P22301 178 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 PEX3P56589 373 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 GPC5P78333 572 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 BTBD8Q5XKL5 378 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 AGR3Q8TD06 166 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 FOXP3Q9BZS1 431 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 SLC13A1Q9BZW2 595 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 ANAPC7Q9UJX3 599 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 TIPRLO75663 272 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 PSMC3P17980 439 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 SRLQ86TD4 932 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 CLEC4FQ8N1N0 589 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 MB21D1Q8N884 522 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 BHMT2Q9H2M3 363 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 ANKARQ7Z5J8 1434 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 GTF2E2P29084 291 aaKnown RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 FEN1P39748 380 aaKnown RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 CDK8P49336 464 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 QTRT2Q9H974 415 aaKnown RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 BSDC1Q9NW68 430 aaPredicted RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 MRPL39Q9NYK5 338 aaKnown RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 PSMD12O00232 456 aaPredicted RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 SERPINB3P29508 390 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 GRAPQ13588 217 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 ZNF699Q32M78 642 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 FASTKD1Q53R41 847 aaKnown RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 C2orf69Q8N8R5 385 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 SNX31Q8N9S9 440 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 GRAPLQ8TC17 118 aaPredicted RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 MTA3Q9BTC8 594 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 DBNDD1Q9H9R9 158 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 ATP7BP35670 1465 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 AP3B1O00203 1094 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 SKAP2O75563 359 aaPredicted RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 FGGP02679 453 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 DYNLL1P63167 89 aaKnown RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 SYNPO2Q9UMS6 1093 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 C4BPBP20851 252 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 MLH1P40692 756 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 AP2B1P63010 937 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 STX12Q86Y82 276 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 ATXN7L3BQ96GX2 97 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 PUS3Q9BZE2 481 aaKnown RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 NOP53Q9NZM5 478 aaKnown RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 FOXP2O15409 715 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 TAP1Q03518 808 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 MTMR1Q13613 665 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 CASP8Q14790 479 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 HIBCHQ6NVY1 386 aaPredicted RBP12.7□□□□□ -0.38
PCF11-201ENST00000298281 ADAMTS1Q9UHI8 967 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 C16orf96A6NNT2 1141 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 PIK3R2O00459 728 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 ACSL3O95573 720 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 GRIK1P39086 918 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 RAET1EQ8TD07 263 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 ADI1Q9BV57 179 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 BRD8Q9H0E9 1235 aa12.7□□□□□ -0.38
PCF11-201ENST00000298281 CROCCQ5TZA2 2017 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 CLUP10909 449 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 IRF1P10914 325 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 EIF2AK2P19525 551 aaKnown RBP12.69□□□□□ -0.38
PCF11-201ENST00000298281 CHRNA3P32297 505 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 JADE3Q92613 823 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 STOML1Q9UBI4 398 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 CNOT8Q9UFF9 292 aaKnown RBP12.69□□□□□ -0.38
PCF11-201ENST00000298281 DCDC2Q9UHG0 476 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 FEM1BQ9UK73 627 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 ZBTB1Q9Y2K1 713 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 ANO9A1A5B4 782 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 MYBL1P10243 752 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 ARF4P18085 180 aaPredicted RBP12.69□□□□□ -0.38
PCF11-201ENST00000298281 AP3M2P53677 418 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 PSMC6P62333 389 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 MRPS35P82673 323 aaKnown RBP12.69□□□□□ -0.38
PCF11-201ENST00000298281 RFX8Q6ZV50 586 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 C19orf60Q96EN9 201 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 SAYSD1Q9NPB0 183 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 SPASTQ9UBP0 616 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 ADGRA2Q96PE1 1338 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 STK36Q9NRP7 1315 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 CTIFO43310 598 aaKnown RBP12.69□□□□□ -0.38
PCF11-201ENST00000298281 ATXN3P54252 364 aaPredicted RBP12.69□□□□□ -0.38
PCF11-201ENST00000298281 CYGBQ8WWM9 190 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 FAM47DPA6NHR8 397 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 SRGAP2O75044 1071 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 FAM107AO95990 144 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 BRAFP15056 766 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 KRT20P35900 424 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 ARHGEF7Q14155 803 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 CNGA2Q16280 664 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 LCORLQ8N3X6 602 aa12.69□□□□□ -0.38
PCF11-201ENST00000298281 VPS37AQ8NEZ2 397 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms