RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SRGAP1Q7Z6B7 1085 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 PLXDC1Q8IUK5 500 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 C3orf20Q8ND61 904 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 DNERQ8NFT8 737 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 RAB24Q969Q5 203 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 TIFAQ96CG3 184 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 TMX3Q96JJ7 454 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 ZNF512Q96ME7 567 aaPredicted RBP5.71□□□□□ -1.5
CCDC54-201ENST00000261058 GNRHR2Q96P88 292 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 ADAM7Q9H2U9 754 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 ZCCHC4Q9H5U6 513 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 PLA2G3Q9NZ20 509 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 RTEL1Q9NZ71 1219 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 MOCS1Q9NZB8 636 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 SLC23A1Q9UHI7 598 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 STXBP5LQ9Y2K9 1186 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 ACTL7AQ9Y615 435 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 A0A088AWK7 358 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 PATE3B3GLJ2 98 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 B5MCH6 92 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 TEX33O43247 280 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 CAND2O75155 1236 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 ARIH2O95376 493 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 ZBED1O96006 694 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 FTLP02792 175 aaPredicted RBP5.7□□□□□ -1.5
CCDC54-201ENST00000261058 SYN1P17600 705 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 PTPN7P35236 360 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 ALDH1A3P47895 512 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 PURAQ00577 322 aaKnown RBP5.7□□□□□ -1.5
CCDC54-201ENST00000261058 GRM7Q14831 915 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 METTL24Q5JXM2 366 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 AFMIDQ63HM1 303 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 MFSD5Q6N075 450 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 APBB1IPQ7Z5R6 666 aaPredicted RBP5.7□□□□□ -1.5
CCDC54-201ENST00000261058 PLBD2Q8NHP8 589 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 CDK5RAP3Q96JB5 506 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 FAM167AQ96KS9 214 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 MPHOSPH9Q99550 1183 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 LSM14BQ9BX40 385 aaKnown RBP5.7□□□□□ -1.5
CCDC54-201ENST00000261058 ARNT2Q9HBZ2 717 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 NCDNQ9UBB6 729 aa5.7□□□□□ -1.5
CCDC54-201ENST00000261058 FRMPD2Q68DX3 1309 aaPredicted RBP5.69□□□□□ -1.5
CCDC54-201ENST00000261058 CCDC194A0A1B0GVG4 234 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 LRRC14BA6NHZ5 514 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 CXorf49A8MYA2 514 aaPredicted RBP5.69□□□□□ -1.5
CCDC54-201ENST00000261058 TPP1O14773 563 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 FOXS1O43638 330 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 FTH1P19P0C7X4 201 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 TRIM27P14373 513 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 MALP21145 153 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 HTR1BP28222 390 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 ZNF280AP59817 542 aaPredicted RBP5.69□□□□□ -1.5
CCDC54-201ENST00000261058 FOXL1Q12952 345 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 SNAPC2Q13487 334 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 CSRP2Q16527 193 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 FAM214AQ32MH5 1076 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 ANO6Q4KMQ2 910 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 KHDC1Q4VXA5 237 aaKnown RBP5.69□□□□□ -1.5
CCDC54-201ENST00000261058 RSPH3Q86UC2 560 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 FUKQ8N0W3 1084 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 CAMKK1Q8N5S9 505 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 SLC35B2Q8TB61 432 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 KLHDC4Q8TBB5 520 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 SARGQ9BW04 601 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 L1RE1Q9UN81 338 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 ZFR2Q9UPR6 939 aaKnown RBP5.69□□□□□ -1.5
CCDC54-201ENST00000261058 SH3BP1Q9Y3L3 701 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 NR2E3Q9Y5X4 410 aa5.69□□□□□ -1.5
CCDC54-201ENST00000261058 PNPLA7Q6ZV29 1317 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 A0A0G2JLL6 359 aaPredicted RBP5.68□□□□□ -1.5
CCDC54-201ENST00000261058 NPEPPSL1A6NEC2 478 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 RHCEP18577 417 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 RHDQ02161 417 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 BMT2Q1RMZ1 405 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 UBXN11Q5T124 520 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 FKBP15Q5T1M5 1219 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 ANKS6Q68DC2 871 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 NPNTQ6UXI9 565 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 CIR1Q86X95 450 aaPredicted RBP5.68□□□□□ -1.5
CCDC54-201ENST00000261058 FAM90A1Q86YD7 464 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 MDGA1Q8NFP4 955 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 FBXO18Q8NFZ0 1043 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 FBXO41Q8TF61 875 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 STON2Q8WXE9 905 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 VRK1Q99986 396 aaPredicted RBP5.68□□□□□ -1.5
CCDC54-201ENST00000261058 B3GNT5Q9BYG0 378 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 FAM204AQ9H8W3 233 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 MAN1C1Q9NR34 630 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 SIDT1Q9NXL6 827 aaKnown RBP5.68□□□□□ -1.5
CCDC54-201ENST00000261058 RAPGEFL1Q9UHV5 662 aa5.68□□□□□ -1.5
CCDC54-201ENST00000261058 TBKBP1A7MCY6 615 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 ITGB3P05106 788 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 SNRPA1P09661 255 aaKnown RBP5.67□□□□□ -1.5
CCDC54-201ENST00000261058 MYBP10242 640 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 TYRP14679 529 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 RAB1AP62820 205 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 PTH1RQ03431 593 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 SWSAP1Q6NVH7 229 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 DRICH1Q6PGQ1 229 aaPredicted RBP5.67□□□□□ -1.5
CCDC54-201ENST00000261058 SLC4A10Q6U841 1118 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms