RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 LACTB2Q53H82 288 aaPredicted RBP16.32■□□□□ 0.2
DDX56-201ENST00000258772 ELMO3Q96BJ8 720 aa16.32■□□□□ 0.2
DDX56-201ENST00000258772 HVCN1Q96D96 273 aa16.32■□□□□ 0.2
DDX56-201ENST00000258772 MAP3K20Q9NYL2 800 aaKnown RBP16.32■□□□□ 0.2
DDX56-201ENST00000258772 WDR46O15213 610 aaKnown RBP16.31■□□□□ 0.2
DDX56-201ENST00000258772 SFNP31947 248 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 SLCO1A2P46721 670 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 CALCOCO2Q13137 446 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 DMP1Q13316 513 aaPredicted RBP16.31■□□□□ 0.2
DDX56-201ENST00000258772 AUHQ13825 339 aaKnown RBP16.31■□□□□ 0.2
DDX56-201ENST00000258772 LLGL1Q15334 1064 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 PPP1R7Q15435 360 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 SLC39A4Q6P5W5 647 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 ANO5Q75V66 913 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 SV2AQ7L0J3 742 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 CCT6BQ92526 530 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 P3H4Q92791 437 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 SLCO2A1Q92959 643 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 PLVAPQ9BX97 442 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 SLC38A10Q9HBR0 1119 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 KMT5AQ9NQR1 393 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 KLC4Q9NSK0 619 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 INTS9Q9NV88 658 aaKnown RBP16.31■□□□□ 0.2
DDX56-201ENST00000258772 WDR81Q562E7 1941 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 DLATP10515 647 aaKnown RBP16.31■□□□□ 0.2
DDX56-201ENST00000258772 GTF2H1P32780 548 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 CYP24A1Q07973 514 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 CLEC16AQ2KHT3 1053 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 ZNF568Q3ZCX4 644 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 C1orf54Q8WWF1 131 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 NTPCRQ9BSD7 190 aaKnown RBP16.31■□□□□ 0.2
DDX56-201ENST00000258772 ROPN1BQ9BZX4 212 aaPredicted RBP16.31■□□□□ 0.2
DDX56-201ENST00000258772 STMN4Q9H169 189 aaPredicted RBP16.31■□□□□ 0.2
DDX56-201ENST00000258772 KDM4CQ9H3R0 1056 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 ROPN1Q9HAT0 212 aaPredicted RBP16.31■□□□□ 0.2
DDX56-201ENST00000258772 SLC40A1Q9NP59 571 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 TCEAL9Q9UHQ7 104 aa16.31■□□□□ 0.2
DDX56-201ENST00000258772 TP73O15350 636 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 ASAP2O43150 1006 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 MAPK4P31152 587 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 SCTRP47872 440 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 KRT76Q01546 638 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 SGO2Q562F6 1265 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 MFSD5Q6N075 450 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 TRMT10CQ7L0Y3 403 aaKnown RBP16.3■□□□□ 0.2
DDX56-201ENST00000258772 PIGWQ7Z7B1 504 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 CCDC25Q86WR0 208 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 SAMD3Q8N6K7 520 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 CCDC197Q8NCU1 140 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 BSNDQ8WZ55 320 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 POMGNT1Q8WZA1 660 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 CCDC134Q9H6E4 229 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 WHRNQ9P202 907 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 CALCAP01258 141 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 USP37Q86T82 979 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 SPIRE2Q8WWL2 714 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 LPAR1Q92633 364 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 RMDN3Q96TC7 470 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 PRMT1Q99873 361 aaKnown RBP16.3■□□□□ 0.2
DDX56-201ENST00000258772 JPH2Q9BR39 696 aaPredicted RBP16.3■□□□□ 0.2
DDX56-201ENST00000258772 PDCD2LQ9BRP1 358 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 AAASQ9NRG9 546 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 ANAPC7Q9UJX3 599 aa16.3■□□□□ 0.2
DDX56-201ENST00000258772 UNGP13051 313 aaPredicted RBP16.29■□□□□ 0.2
DDX56-201ENST00000258772 KRT5P13647 590 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 SCP2P22307 547 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 SOX10P56693 466 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 GCNT1Q02742 428 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 KRT17Q04695 432 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 LRRC34Q8IZ02 419 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 MTMR14Q8NCE2 650 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 PI4K2AQ9BTU6 479 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 CDC42EP4Q9H3Q1 356 aaKnown RBP16.29■□□□□ 0.2
DDX56-201ENST00000258772 TESPA1A2RU30 521 aaPredicted RBP16.29■□□□□ 0.2
DDX56-201ENST00000258772 GHRP10912 638 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 ITIH2P19823 946 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
DDX56-201ENST00000258772 DGKZQ13574 1117 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 SNX1Q13596 522 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 ENOSF1Q7L5Y1 443 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 TAOK1Q7L7X3 1001 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 MCOLN2Q8IZK6 566 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 ANKS4BQ8N8V4 417 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 DDX23Q9BUQ8 820 aaKnown RBP16.29■□□□□ 0.2
DDX56-201ENST00000258772 MOV10L1Q9BXT6 1211 aaKnown RBP16.29■□□□□ 0.2
DDX56-201ENST00000258772 PXMP2Q9NR77 195 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 CHST7Q9NS84 486 aa16.29■□□□□ 0.2
DDX56-201ENST00000258772 CCT8L1PA6NM43 557 aa16.28■□□□□ 0.2
DDX56-201ENST00000258772 RHBDF2Q6PJF5 856 aa16.28■□□□□ 0.2
DDX56-201ENST00000258772 EXOC3L1Q86VI1 746 aa16.28■□□□□ 0.2
DDX56-201ENST00000258772 GPD1LQ8N335 351 aa16.28■□□□□ 0.2
DDX56-201ENST00000258772 TRIM7Q9C029 511 aa16.28■□□□□ 0.2
DDX56-201ENST00000258772 C17orf75Q9HAS0 396 aa16.28■□□□□ 0.2
DDX56-201ENST00000258772 PCDHA10Q9Y5I2 948 aa16.28■□□□□ 0.2
DDX56-201ENST00000258772 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
DDX56-201ENST00000258772 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
DDX56-201ENST00000258772 ATP2C2O75185 946 aa16.28■□□□□ 0.2
DDX56-201ENST00000258772 IVDP26440 423 aa16.28■□□□□ 0.2
DDX56-201ENST00000258772 CNGA2Q16280 664 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms