RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 HIST1H2AGP0C0S8 130 aaPredicted RBP13.98□□□□□ -0.17
COL1A1-201ENST00000225964 AKR1B1P15121 316 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 HIST1H2ADP20671 130 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 SCARF1Q14162 830 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 ANKMY2Q8IV38 441 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 HIST1H2AHQ96KK5 128 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 ZNF512Q96ME7 567 aaPredicted RBP13.98□□□□□ -0.17
COL1A1-201ENST00000225964 HIST1H2AJQ99878 128 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 H2AFJQ9BTM1 129 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 HECW2Q9P2P5 1572 aa13.98□□□□□ -0.17
COL1A1-201ENST00000225964 RNF103-CHMP3A0A140T963 221 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 MYBP10242 640 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 TYK2P29597 1187 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 NECTIN1Q15223 517 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 PCSK7Q16549 785 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 CYP4F11Q9HBI6 524 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 HPS4Q9NQG7 708 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 TRAF3IP3Q9Y228 551 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 TTC37Q6PGP7 1564 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 CENPAP49450 140 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 HIBCHQ6NVY1 386 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-201ENST00000225964 ENOSF1Q7L5Y1 443 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 MAGI2Q86UL8 1455 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 CDK12Q9NYV4 1490 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-201ENST00000225964 FDX1P10109 184 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 LRRC74AQ0VAA2 488 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 C16orf87Q6PH81 154 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 CD2BP2O95400 341 aaKnown RBP13.97□□□□□ -0.17
COL1A1-201ENST00000225964 ARSEP51690 589 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 NR1H3Q13133 447 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 SNX9Q9Y5X1 595 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 NCAPD2Q15021 1401 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 RSPH10B2B2RC85 870 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 H0Y3Z8 333 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 RSPH10BP0C881 870 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 STX19Q8N4C7 294 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 GJD4Q96KN9 370 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-201ENST00000225964 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.97□□□□□ -0.17
COL1A1-201ENST00000225964 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
COL1A1-201ENST00000225964 DDHD2O94830 711 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 CYP19A1P11511 503 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-201ENST00000225964 C11orf96Q7Z7L8 435 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 DNAJC7Q99615 494 aa13.97□□□□□ -0.17
COL1A1-201ENST00000225964 CCDC78A2IDD5 438 aa13.96□□□□□ -0.17
COL1A1-201ENST00000225964 SMARCAD1Q9H4L7 1026 aa13.96□□□□□ -0.17
COL1A1-201ENST00000225964 TUFT1Q9NNX1 390 aa13.96□□□□□ -0.17
COL1A1-201ENST00000225964 PVALEFA0A1B0GWK0 134 aa13.96□□□□□ -0.17
COL1A1-201ENST00000225964 CYP26A1O43174 497 aa13.96□□□□□ -0.17
COL1A1-201ENST00000225964 TOB2Q14106 344 aaPredicted RBP13.96□□□□□ -0.17
COL1A1-201ENST00000225964 COG2Q14746 738 aa13.96□□□□□ -0.17
COL1A1-201ENST00000225964 IZUMO3Q5VZ72 239 aa13.96□□□□□ -0.17
COL1A1-201ENST00000225964 HAUS6Q7Z4H7 955 aa13.96□□□□□ -0.17
COL1A1-201ENST00000225964 C6orf203Q9P0P8 240 aaPredicted RBP13.96□□□□□ -0.17
COL1A1-201ENST00000225964 ERVK-7P63135 1459 aa13.96□□□□□ -0.17
COL1A1-201ENST00000225964 GGPS1O95749 300 aa13.96□□□□□ -0.17
COL1A1-201ENST00000225964 TGS1Q96RS0 853 aaKnown RBP13.96□□□□□ -0.17
COL1A1-201ENST00000225964 C2CD2LO14523 706 aa13.96□□□□□ -0.18
COL1A1-201ENST00000225964 SESN2P58004 480 aaPredicted RBP13.96□□□□□ -0.18
COL1A1-201ENST00000225964 EPHA10Q5JZY3 1008 aa13.96□□□□□ -0.18
COL1A1-201ENST00000225964 NFRKBQ6P4R8 1299 aa13.96□□□□□ -0.18
COL1A1-201ENST00000225964 ZNF579Q8NAF0 562 aaKnown RBP13.96□□□□□ -0.18
COL1A1-201ENST00000225964 TMEM161AQ9NX61 479 aa13.96□□□□□ -0.18
COL1A1-201ENST00000225964 CAPZA2P47755 286 aa13.96□□□□□ -0.18
COL1A1-201ENST00000225964 ALDH1A3P47895 512 aa13.96□□□□□ -0.18
COL1A1-201ENST00000225964 MAGOHP61326 146 aaKnown RBP13.96□□□□□ -0.18
COL1A1-201ENST00000225964 NCAPHQ15003 741 aa13.96□□□□□ -0.18
COL1A1-201ENST00000225964 NBPF20Q3BBV1 942 aa13.96□□□□□ -0.18
COL1A1-201ENST00000225964 NBPF10Q6P3W6 841 aaKnown RBP13.96□□□□□ -0.18
COL1A1-201ENST00000225964 MMS22LQ6ZRQ5 1243 aa13.96□□□□□ -0.18
COL1A1-201ENST00000225964 STAG2Q8N3U4 1231 aa13.96□□□□□ -0.18
COL1A1-201ENST00000225964 GOLPH3LQ9H4A5 285 aa13.96□□□□□ -0.18
COL1A1-201ENST00000225964 HAUS5O94927 633 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 ACOT2P49753 483 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 MED21Q13503 144 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 EPHA7Q15375 998 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 ARHGAP15Q53QZ3 475 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 CCDC137Q6PK04 289 aaKnown RBP13.95□□□□□ -0.18
COL1A1-201ENST00000225964 RFX8Q6ZV50 586 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 HS6ST3Q8IZP7 471 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.95□□□□□ -0.18
COL1A1-201ENST00000225964 ZNRF3Q9ULT6 936 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 CYP27B1O15528 508 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 PSMD3O43242 534 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 NMT1P30419 496 aaKnown RBP13.95□□□□□ -0.18
COL1A1-201ENST00000225964 USP11P51784 963 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 RBP5P82980 135 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 CDC42EP1Q00587 391 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 SLC25A41Q8N5S1 370 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 CEP70Q8NHQ1 597 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 SCFD1Q8WVM8 642 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 RGL1Q9NZL6 768 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 PKP3Q9Y446 797 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 KRT17Q04695 432 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 RPAINQ86UA6 219 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 ATP11CQ8NB49 1132 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 ZNF280CQ8ND82 737 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 SAMD9LQ8IVG5 1584 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 EEF2KO00418 725 aaKnown RBP13.95□□□□□ -0.18
COL1A1-201ENST00000225964 NDUFS3O75489 264 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 CDC27P30260 824 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms