RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 SGSM1Q2NKQ1 1148 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 BTBD8Q5XKL5 378 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 RWDD4Q6NW29 188 aaKnown RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 NOTUMQ6P988 496 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 SPATS2Q86XZ4 545 aaKnown RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 CDKL3Q8IVW4 592 aaPredicted RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 GANCQ8TET4 914 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 MAGEB5Q9BZ81 275 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 VCXQ9H320 206 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 CPVLQ9H3G5 476 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 FBXO2Q9UK22 296 aaPredicted RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 NOVA2Q9UNW9 492 aaKnown RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 TACC3Q9Y6A5 838 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 IFT172Q9UG01 1749 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 COL14A1Q05707 1796 aaKnown RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 DCDC2CA8MYV0 355 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 EXTL3O43909 919 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 KRT7P08729 469 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 MX2P20592 715 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 SDC4P31431 198 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 MSH2P43246 934 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 ACADSBP45954 432 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 CDK17Q00537 523 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 PRKCEQ02156 737 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 KCNH2Q12809 1159 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 PCNX4Q63HM2 1172 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 CC2D1AQ6P1N0 951 aaPredicted RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 TMEM270Q6UE05 265 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 C4orf50Q6ZRC1 276 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 STOX1Q6ZVD7 989 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 FMR1NBQ8N0W7 255 aaPredicted RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 FBXL13Q8NEE6 735 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 AFG1LQ8WV93 481 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 HSPH1Q92598 858 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 OPTNQ96CV9 577 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 ATG4CQ96DT6 458 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 IFT43Q96FT9 208 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 PURBQ96QR8 312 aaKnown RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 CORO1BQ9BR76 489 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 COLEC11Q9BWP8 271 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 SLITRK6Q9H5Y7 841 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 FMN2Q9NZ56 1722 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 LRRD1A4D1F6 860 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 UBE2Q2LH0YL09 131 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 DTNBO60941 627 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 COBLO75128 1261 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 NDUFA10O95299 355 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 ZIC2O95409 532 aaPredicted RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 SLC1A1P43005 524 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 GCLMP48507 274 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 KRT17Q04695 432 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 PPATQ06203 517 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 PPP2R5CQ13362 524 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 ARHGAP15Q53QZ3 475 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 METTL3Q86U44 580 aaKnown RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 DNAAF3Q8N9W5 541 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 STKLD1Q8NE28 680 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 MED15Q96RN5 788 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 PARVAQ9NVD7 372 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 HSPBP1Q9NZL4 362 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 WDR35Q9P2L0 1181 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 PITPNM2Q9BZ72 1349 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 MED1Q15648 1581 aaPredicted RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 SERTM1A2A2V5 107 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 GSTA1P08263 222 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 GSTA2P09210 222 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 CYP2C9P11712 490 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 PRCPP42785 496 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 IRX4P78413 519 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 RAD51Q06609 339 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 GLE1Q53GS7 698 aaKnown RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 KLC3Q6P597 504 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 SDCCAG8Q86SQ7 713 aaPredicted RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 CCDC116Q8IYX3 515 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 SKA2Q8WVK7 121 aaPredicted RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 PRMT6Q96LA8 375 aaPredicted RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 CALN1Q9BXU9 219 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 KIAA1683Q9H0B3 1180 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 DPH5Q9H2P9 285 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 CNOT8Q9UFF9 292 aaKnown RBP4.52□□□□□ -1.69
CFTR-201ENST00000003084 RABGEF1Q9UJ41 708 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 PPP1R9AQ9ULJ8 1098 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 POLIQ9UNA4 740 aa4.52□□□□□ -1.69
CFTR-201ENST00000003084 IGSF9BQ9UPX0 1349 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 PRAMEF27A3QJZ7 478 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 GRID2IPA4D2P6 1211 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 PODXLO00592 558 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 ATP8B1O43520 1251 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 STRNO43815 780 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 SOX5P35711 763 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 GRIK1P39086 918 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 ARHGAP25P42331 645 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 PAPOLAP51003 745 aaKnown RBP4.51□□□□□ -1.69
CFTR-201ENST00000003084 EPHB4P54760 987 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 FKBP1BP68106 108 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 CXCL9Q07325 125 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 PPIL2Q13356 520 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 CUL1Q13616 776 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 LAMB3Q13751 1172 aa4.51□□□□□ -1.69
CFTR-201ENST00000003084 SH2D4BQ5SQS7 431 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms