RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Ly6kQ9CWP4 154 aa4.92□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Mcm8Q9CWV1 833 aa4.92□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Atp6ap2Q9CYN9 350 aa4.92□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 CenpsQ9D084 142 aa4.92□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Q9D5Y0 588 aa4.92□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Wfdc1Q9ESH5 211 aa4.92□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ptk2bQ9QVP9 1009 aa4.92□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Tcf7l1Q9Z1J1 584 aa4.92□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 IkQ9Z1M8 557 aaKnown RBP4.92□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Arid3bQ9Z1N7 568 aa4.92□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Col12a1Q60847 3120 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Atg4a-psA0A0G2JFS9 396 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Adh6bA0A1D5RMB0 384 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Smpd5D6MZJ6 483 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Zfp408H7BX78 710 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Slc1a4O35874 532 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Lin7bO88951 207 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Mt-CybP00158 381 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 P01653 108 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Pde11aP0C1Q2 933 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 PlaaP27612 794 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ifnar1P33896 590 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Syt2P46097 422 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Pou2f2Q00196 463 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 HdxQ14B70 692 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Q3V0E1 1183 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Lrig2Q52KR2 1054 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Asap3Q5U464 904 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 FcgrtQ61559 365 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Trim27Q62158 513 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Avpr1aQ62463 423 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 AtminQ6P9S1 818 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ppp2r5bQ6PD28 497 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ccdc57Q6PHN1 1016 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Tekt3Q6X6Z7 490 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Plin5Q8BVZ1 463 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 MslnlQ8C160 685 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Cstf2tQ8C7E9 632 aaKnown RBP4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ccdc15Q8C9M2 810 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Atg4aQ8C9S8 396 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Nup88Q8CEC0 753 aaKnown RBP4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Coq9Q8K1Z0 313 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 MyripQ8K3I4 856 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Foxe1Q8R2I0 371 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Eaf2Q91ZD6 262 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Gmcl1Q920G9 524 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Gpn3Q9D3W4 284 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 IcmtQ9EQK7 283 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 MyotQ9JIF9 496 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Trpm5Q9JJH7 1158 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Dach1Q9QYB2 751 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 DgkeQ9R1C6 564 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ggps1Q9WTN0 300 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 MycsQ9Z304 431 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Cntnap2Q9CPW0 1332 aa4.91□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Tbc1d4Q8BYJ6 1307 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Robo3Q9Z2I4 1366 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Tbkbp1A2A9T0 611 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Gm12800B1AUV4 484 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Gm12794L7MTS5 483 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Stra6O70491 670 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Adh1P00329 375 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 P04214 136 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Traf1P39428 409 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Lbx1P52955 282 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Usp5P56399 858 aaKnown RBP4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Ube2zQ3UE37 356 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Stxbp3Q60770 592 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Elavl4Q61701 385 aaKnown RBP4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Anks6Q6GQX6 883 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Susd6Q8BGE4 302 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Trmt13Q8BYH3 481 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Pgm5Q8BZF8 567 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Riox2Q8CD15 465 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Vmn1r188Q8K3N2 308 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Gtf3c5Q8R2T8 520 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Uhrf1Q8VDF2 782 aaKnown RBP4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 VillQ91YD6 859 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Myh7Q91Z83 1935 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Fgd4Q91ZT5 766 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Coa7Q921H9 231 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 4930519G04RikQ9CPT7 205 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Pkp2Q9CQ73 795 aaKnown RBP4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Six6os1Q9CTN5 574 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Krtap5-3Q9D226 196 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 AcoxlQ9DBS4 632 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Nkx2-4Q9EQM3 354 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Mkrn2Q9ERV1 416 aaKnown RBP4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 Krt85Q9Z2T6 507 aa4.9□□□□□ -1.62
Hmgb1-203ENSMUST00000110505 PatjQ63ZW7 1834 aa4.9□□□□□ -1.63
Hmgb1-203ENSMUST00000110505 Col4a4Q9QZR9 1682 aa4.89□□□□□ -1.63
Hmgb1-203ENSMUST00000110505 Man1b1A2AJ15 658 aa4.89□□□□□ -1.63
Hmgb1-203ENSMUST00000110505 Zfp949E9Q732 603 aa4.89□□□□□ -1.63
Hmgb1-203ENSMUST00000110505 Cd46O88174 365 aa4.89□□□□□ -1.63
Hmgb1-203ENSMUST00000110505 Cxcl12P40224 93 aa4.89□□□□□ -1.63
Hmgb1-203ENSMUST00000110505 PfkmP47857 780 aaKnown RBP4.89□□□□□ -1.63
Hmgb1-203ENSMUST00000110505 Gnat2P50149 354 aa4.89□□□□□ -1.63
Hmgb1-203ENSMUST00000110505 Pcbp1P60335 356 aaKnown RBP4.89□□□□□ -1.63
Hmgb1-203ENSMUST00000110505 Wdr5P61965 334 aa4.89□□□□□ -1.63
Hmgb1-203ENSMUST00000110505 Sumo1P63166 101 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 116.4 ms