RNA–Protein interactions for RNA: YML100W

TSL1, Transcript of Large subunit of trehalose 6-phosphate synthase/phosphatase complex, yeast

Gene TSL1, Length 3,297 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSL1	YML100W	PAC11	P40960	533 aa		4.38	□□□□□ -1.71
TSL1	YML100W	DIM1	P41819	318 aa	Known RBP	4.38	□□□□□ -1.71
TSL1	YML100W	DYN2	Q02647	92 aa		4.38	□□□□□ -1.71
TSL1	YML100W	GPI11	Q06636	219 aa		4.38	□□□□□ -1.71
TSL1	YML100W	TMS1	Q12116	473 aa		4.38	□□□□□ -1.71
TSL1	YML100W	YOR114W	Q12219	294 aa		4.38	□□□□□ -1.71
TSL1	YML100W	SAS5	Q99314	248 aa		4.38	□□□□□ -1.71
TSL1	YML100W	YOR304C-A	O14468	76 aa		4.38	□□□□□ -1.71
TSL1	YML100W	MES1	P00958	751 aa	Known RBP	4.38	□□□□□ -1.71
TSL1	YML100W	EPT1	P22140	391 aa		4.38	□□□□□ -1.71
TSL1	YML100W	AIM17	P23180	465 aa	Known RBP	4.38	□□□□□ -1.71
TSL1	YML100W	RPS2	P25443	254 aa	Known RBP	4.38	□□□□□ -1.71
TSL1	YML100W	ACH1	P32316	526 aa		4.38	□□□□□ -1.71
TSL1	YML100W	ECM25	P32525	599 aa		4.38	□□□□□ -1.71
TSL1	YML100W	MCH2	P36032	473 aa		4.38	□□□□□ -1.71
TSL1	YML100W	APL3	P38065	1025 aa		4.38	□□□□□ -1.71
TSL1	YML100W	FAU1	P40099	211 aa		4.38	□□□□□ -1.71
TSL1	YML100W	PRM10	P42946	383 aa		4.38	□□□□□ -1.71
TSL1	YML100W	RSM27	P53305	110 aa		4.38	□□□□□ -1.71
TSL1	YML100W	RPL22B	P56628	122 aa	Known RBP	4.38	□□□□□ -1.71
TSL1	YML100W	ARL3	Q02804	198 aa		4.38	□□□□□ -1.71
TSL1	YML100W	YMR087W	Q04299	284 aa		4.38	□□□□□ -1.71
TSL1	YML100W	DCN1	Q12395	269 aa		4.38	□□□□□ -1.71
TSL1	YML100W	FMP16	Q12497	93 aa		4.38	□□□□□ -1.71
TSL1	YML100W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
TSL1	YML100W	UPS2	P35200	230 aa		4.37	□□□□□ -1.71
TSL1	YML100W	SOR1	P35497	357 aa	Known RBP	4.37	□□□□□ -1.71
TSL1	YML100W	YAL037W	P39728	267 aa		4.37	□□□□□ -1.71
TSL1	YML100W	TPS1	Q00764	495 aa	Known RBP	4.37	□□□□□ -1.71
TSL1	YML100W	YPL062W	Q02781	134 aa		4.37	□□□□□ -1.71
TSL1	YML100W	SOR2	Q07786	357 aa		4.37	□□□□□ -1.71
TSL1	YML100W	SKI7	Q08491	747 aa	Predicted RBP	4.37	□□□□□ -1.71
TSL1	YML100W	RPN13	O13563	156 aa		4.37	□□□□□ -1.71
TSL1	YML100W	CDC7	P06243	507 aa		4.37	□□□□□ -1.71
TSL1	YML100W	RPS14A	P06367	137 aa	Known RBP	4.37	□□□□□ -1.71
TSL1	YML100W	QCR2	P07257	368 aa		4.37	□□□□□ -1.71
TSL1	YML100W	ATR1	P13090	542 aa		4.37	□□□□□ -1.71
TSL1	YML100W	HXT2	P23585	541 aa		4.37	□□□□□ -1.71
TSL1	YML100W	CHA1	P25379	360 aa	Known RBP	4.37	□□□□□ -1.71
TSL1	YML100W	NUP2	P32499	720 aa		4.37	□□□□□ -1.71
TSL1	YML100W	TIP20	P33891	701 aa		4.37	□□□□□ -1.71
TSL1	YML100W	YBR220C	P38318	560 aa		4.37	□□□□□ -1.71
TSL1	YML100W	RPS14B	P39516	138 aa	Known RBP	4.37	□□□□□ -1.71
TSL1	YML100W	YFR057W	P43625	151 aa		4.37	□□□□□ -1.71
TSL1	YML100W	YJR149W	P47177	404 aa		4.37	□□□□□ -1.71
TSL1	YML100W	ROG1	P53118	685 aa		4.37	□□□□□ -1.71
TSL1	YML100W	OST6	Q03723	332 aa		4.37	□□□□□ -1.71
TSL1	YML100W	YMR034C	Q05131	434 aa	Predicted RBP	4.37	□□□□□ -1.71
TSL1	YML100W	YLR012C	Q07927	99 aa		4.37	□□□□□ -1.71
TSL1	YML100W	YPR064W	Q12492	139 aa		4.37	□□□□□ -1.71
TSL1	YML100W	YLR361C-A	Q3E795	98 aa		4.37	□□□□□ -1.71
TSL1	YML100W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
TSL1	YML100W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	RIP-Chip
TSL1	YML100W	ECM8	P38246	354 aa		4.36	□□□□□ -1.71
TSL1	YML100W	RBG1	P39729	369 aa		4.36	□□□□□ -1.71
TSL1	YML100W	RPL10	P41805	221 aa	Known RBP	4.36	□□□□□ -1.71
TSL1	YML100W	PAM16	P42949	149 aa		4.36	□□□□□ -1.71
TSL1	YML100W	HIT1	P46973	164 aa		4.36	□□□□□ -1.71
TSL1	YML100W	MOG1	P47123	218 aa		4.36	□□□□□ -1.71
TSL1	YML100W	RPS12	P48589	143 aa	Known RBP	4.36	□□□□□ -1.71
TSL1	YML100W	CWC23	P52868	283 aa	Predicted RBP	4.36	□□□□□ -1.71
TSL1	YML100W	BSP1	Q06604	576 aa		4.36	□□□□□ -1.71
TSL1	YML100W	YNG1	Q08465	219 aa		4.36	□□□□□ -1.71
TSL1	YML100W	SCP1	Q08873	200 aa		4.36	□□□□□ -1.71
TSL1	YML100W	YPL199C	Q08954	240 aa		4.36	□□□□□ -1.71
TSL1	YML100W	PER33	Q12144	273 aa		4.36	□□□□□ -1.71
TSL1	YML100W	ATP1	P07251	545 aa	Known RBP	4.36	□□□□□ -1.71
TSL1	YML100W	PRE7	P23724	241 aa	Known RBP	4.36	□□□□□ -1.71
TSL1	YML100W	RNA14	P25298	677 aa	Known RBP	4.36	□□□□□ -1.71
TSL1	YML100W	RSM23	Q01163	450 aa		4.36	□□□□□ -1.71
TSL1	YML100W	GAS3	Q03655	524 aa		4.36	□□□□□ -1.71
TSL1	YML100W	BCH1	Q05029	724 aa		4.36	□□□□□ -1.71
TSL1	YML100W	IRC10	Q08118	586 aa		4.36	□□□□□ -1.71
TSL1	YML100W	YOR029W	Q12243	111 aa		4.36	□□□□□ -1.71
TSL1	YML100W	FKS1	P38631	1876 aa	Known RBP	4.36	□□□□□ -1.71
TSL1	YML100W	RPS13	P05756	151 aa	Known RBP	4.36	□□□□□ -1.71
TSL1	YML100W	RPL27A	P0C2H6	136 aa	Known RBP	4.36	□□□□□ -1.71
TSL1	YML100W	RPL27B	P0C2H7	136 aa	Known RBP	4.36	□□□□□ -1.71
TSL1	YML100W	PET54	P10834	293 aa		4.36	□□□□□ -1.71
TSL1	YML100W	ERG4	P25340	473 aa		4.36	□□□□□ -1.71
TSL1	YML100W	IDP2	P41939	412 aa		4.36	□□□□□ -1.71
TSL1	YML100W	TIM44	Q01852	431 aa		4.36	□□□□□ -1.71
TSL1	YML100W	INP1	Q03694	420 aa		4.36	□□□□□ -1.71
TSL1	YML100W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
TSL1	YML100W	THI72	Q08579	599 aa		4.36	□□□□□ -1.71
TSL1	YML100W	PPZ1	P26570	692 aa		4.35	□□□□□ -1.71
TSL1	YML100W	SKG1	P36169	355 aa		4.35	□□□□□ -1.71
TSL1	YML100W	PFS1	P38872	237 aa		4.35	□□□□□ -1.71
TSL1	YML100W	AST2	P39945	430 aa	Known RBP	4.35	□□□□□ -1.71
TSL1	YML100W	SLM2	P53955	656 aa		4.35	□□□□□ -1.71
TSL1	YML100W	TMN2	Q04562	672 aa		4.35	□□□□□ -1.71
TSL1	YML100W	NOC4	Q06512	552 aa	Predicted RBP	4.35	□□□□□ -1.71
TSL1	YML100W	BLM10	P43583	2143 aa		4.35	□□□□□ -1.71
TSL1	YML100W	MRP1	P10662	321 aa	Known RBP	4.35	□□□□□ -1.71
TSL1	YML100W	ERD2	P18414	219 aa		4.35	□□□□□ -1.71
TSL1	YML100W	NUP1	P20676	1076 aa		4.35	□□□□□ -1.71
TSL1	YML100W	MIR1	P23641	311 aa	Known RBP	4.35	□□□□□ -1.71
TSL1	YML100W	GAT1	P43574	510 aa		4.35	□□□□□ -1.71
TSL1	YML100W	YNL184C	P53876	108 aa		4.35	□□□□□ -1.71
TSL1	YML100W	YMR279C	Q03263	540 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms