RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 CATSPER4Q7RTX7 472 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 APTXQ7Z2E3 356 aaKnown RBP12.54□□□□□ -0.4
LINC00538-201ENST00000626109 CTU1Q7Z7A3 348 aaKnown RBP12.54□□□□□ -0.4
LINC00538-201ENST00000626109 CEP112Q8N8E3 955 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 FAM174AQ8TBP5 190 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 PXYLP1Q8TE99 480 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 UROC1Q96N76 676 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 WDR11Q9BZH6 1224 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 ZNF446Q9NWS9 450 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 CTNND2Q9UQB3 1225 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 NOD1Q9Y239 953 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 FAM50BQ9Y247 325 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 ADGRG1Q9Y653 693 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 LAD1O00515 517 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 HMGCRP04035 888 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 OR52Z1P0C646 297 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 ELNP15502 786 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 PURAQ00577 322 aaKnown RBP12.54□□□□□ -0.4
LINC00538-201ENST00000626109 STIM1Q13586 685 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 ACVR2BQ13705 512 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 KCNV1Q6PIU1 500 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 TCEAL8Q8IYN2 117 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 PJA1Q8NG27 643 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 PARD3BQ8TEW8 1205 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 CPLX3Q8WVH0 158 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 LENG9Q96B70 501 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 ZMAT2Q96NC0 199 aaKnown RBP12.54□□□□□ -0.4
LINC00538-201ENST00000626109 WDR24Q96S15 920 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 KCNH7Q9NS40 1196 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 MYO1AQ9UBC5 1043 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 ZNF232Q9UNY5 417 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 FHOD1Q9Y613 1164 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 PTCH2Q9Y6C5 1203 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 KLHL33A6NCF5 533 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 IGHA2P01877 340 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 PNMA6AP0CW24 399 aaPredicted RBP12.53□□□□□ -0.4
LINC00538-201ENST00000626109 ARP10275 920 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 ICAM3P32942 547 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 RXRGP48443 463 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 NCOA4Q13772 614 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 TTLL4Q14679 1199 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 FAM102BQ5T8I3 360 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 DTHD1Q6ZMT9 781 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 TAX1BP1Q86VP1 789 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 THNSL2Q86YJ6 484 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 LRRN4CLQ8ND94 238 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 SCFD2Q8WU76 684 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 ZNF577Q9BSK1 485 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 PRKD2Q9BZL6 878 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 PTPN22Q9Y2R2 807 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 N6AMT1Q9Y5N5 214 aa12.53□□□□□ -0.4
LINC00538-201ENST00000626109 SPATA31C2B4DYI2 1134 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 MSH4O15457 936 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 IL33O95760 270 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 CASP14P31944 242 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 GRK4P32298 578 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 STAT6P42226 847 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 COX10Q12887 443 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 DSC3Q14574 896 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 KARSQ15046 597 aaKnown RBP12.52□□□□□ -0.4
LINC00538-201ENST00000626109 LLGL2Q6P1M3 1020 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 SLFN12Q8IYM2 578 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.52□□□□□ -0.4
LINC00538-201ENST00000626109 NELFBQ8WX92 580 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 BHMTQ93088 406 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 FAM20AQ96MK3 541 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 KATNBL1Q9H079 304 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 TMEM60Q9H2L4 133 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 AGO4Q9HCK5 861 aaKnown RBP12.52□□□□□ -0.4
LINC00538-201ENST00000626109 ARFGAP3Q9NP61 516 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 KCNMB3Q9NPA1 279 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 PKD2L1Q9P0L9 805 aa12.52□□□□□ -0.4
LINC00538-201ENST00000626109 CCDC66A2RUB6 948 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 CTAGE9A4FU28 777 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 TUBBP07437 444 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 KRT31Q15323 416 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 GFOD2Q3B7J2 385 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 TCP11X2Q5H9J9 407 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 TAPT1Q6NXT6 567 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 PLBD1Q6P4A8 553 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 RASSF8Q8NHQ8 419 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 ETNPPLQ8TBG4 499 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 NOC3LQ8WTT2 800 aaKnown RBP12.52□□□□□ -0.41
LINC00538-201ENST00000626109 DESI2Q9BSY9 194 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 CUEDC2Q9H467 287 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 MAGEF1Q9HAY2 307 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 LZTFL1Q9NQ48 299 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 NPDC1Q9NQX5 325 aaPredicted RBP12.52□□□□□ -0.41
LINC00538-201ENST00000626109 OBP2AQ9NY56 170 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 FBXL5Q9UKA1 691 aa12.52□□□□□ -0.41
LINC00538-201ENST00000626109 FAM25EA8MYX2 175 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 KCNJ18B7U540 433 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 ZNF865P0CJ78 1059 aaPredicted RBP12.51□□□□□ -0.41
LINC00538-201ENST00000626109 TXNP10599 105 aaKnown RBP12.51□□□□□ -0.41
LINC00538-201ENST00000626109 MTHFD1P11586 935 aaKnown RBP12.51□□□□□ -0.41
LINC00538-201ENST00000626109 CYBAP13498 195 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 PRPHP41219 470 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 PPP1R2P41236 205 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 COPB1P53618 953 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms