RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 PRDM16Q9HAZ2 1276 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 CNTNAP1P78357 1384 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 RIPK2O43353 540 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 ATP9AO75110 1047 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 DLATP10515 647 aaKnown RBP12.66□□□□□ -0.38
C11orf54-215ENST00000617482 PTGER2P43116 358 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 SOX10P56693 466 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 CCDC38Q502W7 563 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 ANKRD20A8PQ5CZ79 823 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 XKR9Q5GH70 373 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 C6orf118Q5T5N4 469 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 OGFOD1Q8N543 542 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 TAS1R2Q8TE23 839 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 SHC3Q92529 594 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 ZNF341Q9BYN7 854 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 RAVER2Q9HCJ3 691 aaKnown RBP12.66□□□□□ -0.38
C11orf54-215ENST00000617482 PLA2G6O60733 806 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 GGPS1O95749 300 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 CYP1A2P05177 515 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 CNGA1P29973 690 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 MMP13P45452 471 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 IFNAR2P48551 515 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 SMTNP53814 917 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 RWDD2BP57060 319 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 PPP1R7Q15435 360 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 SIX1Q15475 284 aaPredicted RBP12.65□□□□□ -0.38
C11orf54-215ENST00000617482 KRT39Q6A163 491 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
C11orf54-215ENST00000617482 RNF207Q6ZRF8 634 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 HELQQ8TDG4 1101 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 PARD3BQ8TEW8 1205 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 CNKSR1Q969H4 720 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 TAAR1Q96RJ0 339 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 PRMT1Q99873 361 aaKnown RBP12.65□□□□□ -0.38
C11orf54-215ENST00000617482 PI4K2AQ9BTU6 479 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 MTFR1LQ9H019 292 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 SLC40A1Q9NP59 571 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 KLC4Q9NSK0 619 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 INTS9Q9NV88 658 aaKnown RBP12.65□□□□□ -0.38
C11orf54-215ENST00000617482 PARP2Q9UGN5 583 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 UBIAD1Q9Y5Z9 338 aa12.65□□□□□ -0.38
C11orf54-215ENST00000617482 ASTN2O75129 1339 aaPredicted RBP12.65□□□□□ -0.38
C11orf54-215ENST00000617482 MTA2O94776 668 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 KRT5P13647 590 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 PDE6CP51160 858 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 DRP2Q13474 957 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 ARMC9Q7Z3E5 817 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 ATXN2LQ8WWM7 1075 aaKnown RBP12.64□□□□□ -0.39
C11orf54-215ENST00000617482 ART4Q93070 314 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 CENPTQ96BT3 561 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 ZNF317Q96PQ6 595 aaPredicted RBP12.64□□□□□ -0.39
C11orf54-215ENST00000617482 CEP89Q96ST8 783 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 DDX23Q9BUQ8 820 aaKnown RBP12.64□□□□□ -0.39
C11orf54-215ENST00000617482 TRIM7Q9C029 511 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 TCEAL9Q9UHQ7 104 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 CNOT7Q9UIV1 285 aaKnown RBP12.64□□□□□ -0.39
C11orf54-215ENST00000617482 TBX20Q9UMR3 447 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 RASGRF2O14827 1237 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 RASSF9O75901 435 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 ECEL1O95672 775 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 RARGP13631 454 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 NPTX2P47972 431 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 CDR2Q01850 454 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 ADCY2Q08462 1091 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 SLMAPQ14BN4 828 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 CYP1B1Q16678 543 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 C2CD6Q53TS8 623 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 MORC4Q8TE76 937 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 TMEM174Q8WUU8 243 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 TAOK3Q9H2K8 898 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 CD248Q9HCU0 757 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 DNAJC17Q9NVM6 304 aaKnown RBP12.64□□□□□ -0.39
C11orf54-215ENST00000617482 RAB20Q9NX57 234 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 GTF3C4Q9UKN8 822 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 PASKQ96RG2 1323 aa12.64□□□□□ -0.39
C11orf54-215ENST00000617482 RBBP6Q7Z6E9 1792 aaKnown RBP12.64□□□□□ -0.39
C11orf54-215ENST00000617482 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
C11orf54-215ENST00000617482 DENND3A2RUS2 1198 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 ACSL3O95573 720 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 CCNE2O96020 404 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 AGTP01019 485 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 VIMP08670 466 aaKnown RBP12.63□□□□□ -0.39
C11orf54-215ENST00000617482 SCTRP47872 440 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 NCKAP1LP55160 1127 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 TRIP13Q15645 432 aaPredicted RBP12.63□□□□□ -0.39
C11orf54-215ENST00000617482 LONRF1Q17RB8 773 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 PCNX4Q63HM2 1172 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 OTUD6AQ7L8S5 288 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 LRRC34Q8IZ02 419 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 TMEM161BQ8NDZ6 487 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 SYTL5Q8TDW5 730 aaPredicted RBP12.63□□□□□ -0.39
C11orf54-215ENST00000617482 ATG4AQ8WYN0 398 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 NT5C1BQ96P26 610 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 JPH2Q9BR39 696 aaPredicted RBP12.63□□□□□ -0.39
C11orf54-215ENST00000617482 ACTR5Q9H9F9 607 aaPredicted RBP12.63□□□□□ -0.39
C11orf54-215ENST00000617482 HAUS2Q9NVX0 235 aa12.63□□□□□ -0.39
C11orf54-215ENST00000617482 COL2A1P02458 1487 aaPredicted RBP12.63□□□□□ -0.39
C11orf54-215ENST00000617482 TESPA1A2RU30 521 aaPredicted RBP12.63□□□□□ -0.39
C11orf54-215ENST00000617482 MAPK13O15264 365 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms