RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 USP50Q70EL3 339 aaPredicted RBP11.7□□□□□ -0.54
SHANK2-219ENST00000606715 GPD1LQ8N335 351 aa11.7□□□□□ -0.54
SHANK2-219ENST00000606715 TMEM169Q96HH4 297 aa11.7□□□□□ -0.54
SHANK2-219ENST00000606715 SELENONQ9NZV5 590 aa11.7□□□□□ -0.54
SHANK2-219ENST00000606715 KIF20BQ96Q89 1820 aa11.7□□□□□ -0.54
SHANK2-219ENST00000606715 CXorf38Q8TB03 319 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 SAMSN1Q9NSI8 373 aaKnown RBP11.69□□□□□ -0.54
SHANK2-219ENST00000606715 NWD1Q149M9 1564 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 GAS2O43903 313 aaKnown RBP11.69□□□□□ -0.54
SHANK2-219ENST00000606715 TDP2O95551 362 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 YWHABP31946 246 aaKnown RBP11.69□□□□□ -0.54
SHANK2-219ENST00000606715 KRT31Q15323 416 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 TRIM48Q8IWZ4 208 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 PYROXD1Q8WU10 500 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 MUC3BQ9H195 1237 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 XAB2Q9HCS7 855 aaKnown RBP11.69□□□□□ -0.54
SHANK2-219ENST00000606715 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.69□□□□□ -0.54
SHANK2-219ENST00000606715 CDC23Q9UJX2 597 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 ARHGAP10A1A4S6 786 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 LGALS16A8MUM7 142 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 H3BRJ5 948 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 PDXKO00764 312 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 OPHN1O60890 802 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 SYF2O95926 243 aaKnown RBP11.69□□□□□ -0.54
SHANK2-219ENST00000606715 PRKCBP05771 671 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 IL1R1P14778 569 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 AKT1P31749 480 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 CAP2P40123 477 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 MYRIPQ8NFW9 859 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 CCDC138Q96M89 665 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 YME1L1Q96TA2 773 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 MFSD1Q9H3U5 465 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 MANSC4A6NHS7 340 aaPredicted RBP11.69□□□□□ -0.54
SHANK2-219ENST00000606715 MIF4GDA9UHW6 222 aaKnown RBP11.69□□□□□ -0.54
SHANK2-219ENST00000606715 POLRMTO00411 1230 aaKnown RBP11.69□□□□□ -0.54
SHANK2-219ENST00000606715 VAMP7P51809 220 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 PLTPP55058 493 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 AP1B1Q10567 949 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 LAMC2Q13753 1193 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 PDCD2Q16342 344 aaPredicted RBP11.69□□□□□ -0.54
SHANK2-219ENST00000606715 GPRASP2Q96D09 838 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 SLC38A7Q9NVC3 462 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 GOLGA8KD6RF30 607 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 C2CD2LO14523 706 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 DUOXA2Q1HG44 320 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 CYP4A22Q5TCH4 519 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 CENPUQ71F23 418 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 SAMD7Q7Z3H4 446 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 TMEM39BQ9GZU3 492 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 MROH8Q9H579 483 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 DNAJC12Q9UKB3 198 aa11.69□□□□□ -0.54
SHANK2-219ENST00000606715 POTEFA5A3E0 1075 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 POTEIP0CG38 1075 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 GCLMP48507 274 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 PSMC1P62191 440 aaKnown RBP11.68□□□□□ -0.54
SHANK2-219ENST00000606715 TRIM68Q6AZZ1 485 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 ALKBH5Q6P6C2 394 aaKnown RBP11.68□□□□□ -0.54
SHANK2-219ENST00000606715 POTEGQ6S5H5 508 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 NR2E3Q9Y5X4 410 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 IQANK1A0A1B0GTG1 560 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 KDM1AO60341 852 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 NCF2P19878 526 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-219ENST00000606715 HSD17B4P51659 736 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 ATN1P54259 1190 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-219ENST00000606715 RWDD2BP57060 319 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 TMEM62Q0P6H9 643 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 STILQ15468 1287 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 ELF2Q15723 593 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 DGKDQ16760 1214 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 RBM41Q96IZ5 413 aaKnown RBP11.68□□□□□ -0.54
SHANK2-219ENST00000606715 NHEJ1Q9H9Q4 299 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-219ENST00000606715 RBAKQ9NYW8 714 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-219ENST00000606715 POLLQ9UGP5 575 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 IPPQ9Y573 584 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 HSPA4LO95757 839 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 EIF4A3P38919 411 aaKnown RBP11.68□□□□□ -0.54
SHANK2-219ENST00000606715 SARM1Q6SZW1 724 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 STOX1Q6ZVD7 989 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 MFN1Q8IWA4 741 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 FMR1NBQ8N0W7 255 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-219ENST00000606715 TTC13Q8NBP0 860 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 OR6P1Q8NGX9 317 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 FBXL21Q9UKT6 434 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 RNF168Q8IYW5 571 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-219ENST00000606715 ZC3H15Q8WU90 426 aaKnown RBP11.68□□□□□ -0.54
SHANK2-219ENST00000606715 EPAS1Q99814 870 aa11.68□□□□□ -0.54
SHANK2-219ENST00000606715 AGO2Q9UKV8 859 aaKnown RBP11.68□□□□□ -0.54
SHANK2-219ENST00000606715 SLC16A3O15427 465 aaKnown RBP11.67□□□□□ -0.54
SHANK2-219ENST00000606715 HOXC6P09630 235 aa11.67□□□□□ -0.54
SHANK2-219ENST00000606715 CYP2C9P11712 490 aa11.67□□□□□ -0.54
SHANK2-219ENST00000606715 BFSP2Q13515 415 aa11.67□□□□□ -0.54
SHANK2-219ENST00000606715 FRMD5Q7Z6J6 570 aa11.67□□□□□ -0.54
SHANK2-219ENST00000606715 ZNF513Q8N8E2 541 aaPredicted RBP11.67□□□□□ -0.54
SHANK2-219ENST00000606715 UCMAQ8WVF2 138 aa11.67□□□□□ -0.54
SHANK2-219ENST00000606715 ZMYND12Q9H0C1 365 aa11.67□□□□□ -0.54
SHANK2-219ENST00000606715 PLEKHA5Q9HAU0 1116 aa11.67□□□□□ -0.54
SHANK2-219ENST00000606715 UBE2Q2LH0YL09 131 aa11.67□□□□□ -0.54
SHANK2-219ENST00000606715 HBP1O60381 514 aa11.67□□□□□ -0.54
SHANK2-219ENST00000606715 MYBL1P10243 752 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms