RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 AFF1P51825 1210 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 ASIC1P78348 528 aa18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 MCL1Q07820 350 aa18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 NOLC1Q14978 699 aaKnown RBP eCLIP18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 SLFN12LQ6IEE8 588 aa18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 MAP4K3Q8IVH8 894 aa18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 COLGALT2Q8IYK4 626 aa18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 STAMQ92783 540 aa18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 IGSF21Q96ID5 467 aa18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 CHAMP1Q96JM3 812 aa18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 COLEC11Q9BWP8 271 aa18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 NGRNQ9NPE2 291 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 ANKFY1Q9P2R3 1169 aa18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 DNAJB4Q9UDY4 337 aa18.91■□□□□ 0.62
SHKBP1-212ENST00000596163 NRP1O14786 923 aa18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 GCNT3O95395 438 aa18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 HARSP12081 509 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 PFKFB1P16118 471 aa18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 DNAJB1P25685 340 aa18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 OR1G1P47890 313 aa18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 DSC1Q08554 894 aa18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 CAMK1Q14012 370 aa18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 DDX53Q86TM3 631 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 GSTCDQ8NEC7 633 aa18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 CCDC34Q96HJ3 373 aa18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 ZBTB45Q96K62 511 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 ACCSQ96QU6 501 aa18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 CHD7Q9P2D1 2997 aa18.9■□□□□ 0.62
SHKBP1-212ENST00000596163 FAM237AA0A1B0GTK4 181 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 FSD2A1L4K1 749 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 ABLIM1O14639 778 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 CLTAP09496 248 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 SYKP43405 635 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 OSTNP61366 133 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 POSTNQ15063 836 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 ZC2HC1CQ53FD0 456 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 TCEAL5Q5H9L2 206 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 TMC7Q7Z402 723 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 FSIP1Q8NA03 581 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 HLA-CQ95604 372 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 TMEM206Q9H813 350 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 ENTPD7Q9NQZ7 604 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 TBC1D7Q9P0N9 293 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 THEGQ9P2T0 379 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 SERTAD1Q9UHV2 236 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 HPSEQ9Y251 543 aa18.89■□□□□ 0.61
SHKBP1-212ENST00000596163 PVALEFA0A1B0GWK0 134 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 CSPG5O95196 566 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 MYL1P05976 194 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 AFMP43652 599 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 COASYQ13057 564 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 TUSC3Q13454 348 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 AAK1Q2M2I8 961 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 L1TD1Q5T7N2 865 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 UNC13DQ70J99 1090 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 ATXN2LQ8WWM7 1075 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 TCF25Q9BQ70 676 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 STRA6Q9BX79 667 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 GDPD2Q9HCC8 539 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 SLC38A7Q9NVC3 462 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 CHMP5Q9NZZ3 219 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 NLRC5Q86WI3 1866 aa18.88■□□□□ 0.61
SHKBP1-212ENST00000596163 FSCN2O14926 492 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 PPP1R37O75864 691 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 COL6A3P12111 3177 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 IRS1P35568 1242 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 ERVFC1P60507 584 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 SMC1AQ14683 1233 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 XKR4Q5GH76 650 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 SYCP3Q8IZU3 236 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 VPS52Q8N1B4 723 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 CEP120Q8N960 986 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 TMEM87AQ8NBN3 555 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 CDCA3Q99618 268 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 MSTO1Q9BUK6 570 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 TLE6Q9H808 572 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 PLEKHA5Q9HAU0 1116 aa18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 PRG3Q9Y2Y8 225 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-212ENST00000596163 PRRC2BQ5JSZ5 2229 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 COL4A4P53420 1690 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 A0A0B4J269 797 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 SMIM28A0A1B0GU29 152 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 PTGESO14684 152 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 OGTO15294 1046 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 ACTN4O43707 911 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 B4GALT3O60512 393 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 TADA2AO75478 443 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 NDUFA8P51970 172 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 TPRNQ4KMQ1 711 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 KANK3Q6NY19 840 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 ALKAL1Q6UXT8 129 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 CCDC47Q96A33 483 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 PAGE5Q96GU1 130 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 SNX27Q96L92 541 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 UROC1Q96N76 676 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 TSPAN18Q96SJ8 248 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 BLZF1Q9H2G9 400 aa18.86■□□□□ 0.61
SHKBP1-212ENST00000596163 SSX2IPQ9Y2D8 614 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms