RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 HOXA2O43364 376 aa18.61■□□□□ 0.57
RPRD1A-209ENST00000590898 CLTAP09496 248 aa18.61■□□□□ 0.57
RPRD1A-209ENST00000590898 ITGA4P13612 1032 aa18.61■□□□□ 0.57
RPRD1A-209ENST00000590898 ERCC5P28715 1186 aaPredicted RBP18.61■□□□□ 0.57
RPRD1A-209ENST00000590898 PAK1Q13153 545 aa18.61■□□□□ 0.57
RPRD1A-209ENST00000590898 FBXL18Q96ME1 805 aa18.61■□□□□ 0.57
RPRD1A-209ENST00000590898 CCDC94Q9BW85 323 aaPredicted RBP18.61■□□□□ 0.57
RPRD1A-209ENST00000590898 GIT1Q9Y2X7 761 aa18.61■□□□□ 0.57
RPRD1A-209ENST00000590898 CLIC2O15247 247 aa18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 EXTL3O43909 919 aa18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 DEFB103AP81534 67 aa18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 UVSSAQ2YD98 709 aa18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 KLHL10Q6JEL2 608 aa18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 THNSL1Q8IYQ7 743 aa18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 XXYLT1Q8NBI6 393 aa18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 NELFBQ8WX92 580 aa18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 RNPC3Q96LT9 517 aaKnown RBP18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 ACAP3Q96P50 834 aa18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 NXF3Q9H4D5 531 aaKnown RBP18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 HSPBP1Q9NZL4 362 aa18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 RWDD2AQ9UIY3 292 aa18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 FNDC1Q4ZHG4 1894 aaPredicted RBP18.6■□□□□ 0.57
RPRD1A-209ENST00000590898 NR3C1P04150 777 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 FKBP3Q00688 224 aaKnown RBP18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 IQCB1Q15051 598 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 ANKRD40Q6AI12 368 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 AGMOQ6ZNB7 445 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 GPD1LQ8N335 351 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 SNTG2Q9NY99 539 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 HES2Q9Y543 173 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 HARSP12081 509 aaKnown RBP18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 ADAM9Q13443 819 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 TTI2Q6NXR4 508 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 CRELD2Q6UXH1 353 aaPredicted RBP18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 TDHQ8IZJ6 230 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 CEP120Q8N960 986 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 RNF39Q9H2S5 420 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 PCIF1Q9H4Z3 704 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 PLEKHA5Q9HAU0 1116 aa18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 TOPORSQ9NS56 1045 aaPredicted RBP18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 CPSF3Q9UKF6 684 aaKnown RBP18.59■□□□□ 0.57
RPRD1A-209ENST00000590898 INPPL1O15357 1258 aa18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 DGKIO75912 1065 aa18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 GJB5O95377 273 aa18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 ADRB2P07550 413 aa18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 ATP2A2P16615 1042 aaKnown RBP18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 NR2F2P24468 414 aa18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 PMS1P54277 932 aaKnown RBP18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 YARSP54577 528 aaKnown RBP18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 PLCB2Q00722 1185 aa18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 DHX40Q8IX18 779 aaKnown RBP18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 ZC3H3Q8IXZ2 948 aaKnown RBP18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 ANP32BQ92688 251 aaKnown RBP18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 RSAD1Q9HA92 442 aa18.58■□□□□ 0.56
RPRD1A-209ENST00000590898 TDRD15B5MCY1 1934 aaKnown RBP18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 ANK1P16157 1881 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 ZNF233A6NK53 670 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 MAPK13O15264 365 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 UPP2O95045 317 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 ACOT2P49753 483 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 CCDC173Q0VFZ6 552 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 XKR4Q5GH76 650 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 GLB1LQ6UWU2 654 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 ALKAL1Q6UXT8 129 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 RNF169Q8NCN4 708 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 LPPQ93052 612 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 PPP1R9BQ96SB3 815 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 TSPAN18Q96SJ8 248 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 RPF1Q9H9Y2 349 aaKnown RBP18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 PARP2Q9UGN5 583 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 CTNND2Q9UQB3 1225 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 A0A1W2PPC1 479 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 CETN3O15182 167 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 EXOC3O60645 756 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 OFD1O75665 1012 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 RECQL4O94761 1208 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 AKAP5P24588 427 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 CYP2J2P51589 502 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 OSTNP61366 133 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 HERC6Q8IVU3 1022 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 CD302Q8IX05 232 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 TMEM192Q8IY95 271 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 AOPEPQ8N6M6 819 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 ZNF689Q96CS4 500 aaPredicted RBP18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 PDLIM2Q96JY6 352 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 FAM213AQ9BRX8 229 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 NAT10Q9H0A0 1025 aaKnown RBP18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 TMEM117Q9H0C3 514 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 RNF19AQ9NV58 838 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 KANSL3Q9P2N6 904 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 FRMD4BQ9Y2L6 1034 aa18.57■□□□□ 0.56
RPRD1A-209ENST00000590898 PDCD11Q14690 1871 aaKnown RBP18.56■□□□□ 0.56
RPRD1A-209ENST00000590898 RALGAPA2Q2PPJ7 1873 aa18.56■□□□□ 0.56
RPRD1A-209ENST00000590898 TTC26A0AVF1 554 aa18.56■□□□□ 0.56
RPRD1A-209ENST00000590898 TRIM49BA6NDI0 452 aa18.56■□□□□ 0.56
RPRD1A-209ENST00000590898 MEIS3P2A8K0S8 358 aa18.56■□□□□ 0.56
RPRD1A-209ENST00000590898 HTRA4P83105 476 aaPredicted RBP18.56■□□□□ 0.56
RPRD1A-209ENST00000590898 SNRNP35Q16560 246 aaKnown RBP18.56■□□□□ 0.56
RPRD1A-209ENST00000590898 SLC10A6Q3KNW5 377 aa18.56■□□□□ 0.56
RPRD1A-209ENST00000590898 SEZ6Q53EL9 994 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms