RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 USP38Q8NB14 1042 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 SLC10A4Q96EP9 437 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 ZBTB45Q96K62 511 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 PNMA3Q9UL41 463 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 A0A0B4J269 797 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 IQCA1LA6NCM1 817 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 LDHAP00338 332 aaKnown RBP19.54■□□□□ 0.72
SMPD3-211ENST00000568373 MARK3P27448 753 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 GCNT1Q02742 428 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 ENOSF1Q7L5Y1 443 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 TRIM50Q86XT4 487 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 RHOT2Q8IXI1 618 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 DHX37Q8IY37 1157 aaKnown RBP19.54■□□□□ 0.72
SMPD3-211ENST00000568373 METTL13Q8N6R0 699 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 ACTRT1Q8TDG2 376 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 ATP8B4Q8TF62 1192 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 PRPF31Q8WWY3 499 aaKnown RBP19.54■□□□□ 0.72
SMPD3-211ENST00000568373 TATDN2Q93075 761 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 HES6Q96HZ4 224 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 MSTO1Q9BUK6 570 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 SELENOOQ9BVL4 669 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 STIM2Q9P246 746 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 ANKFY1Q9P2R3 1169 aa19.54■□□□□ 0.72
SMPD3-211ENST00000568373 GAS2O43903 313 aaKnown RBP19.53■□□□□ 0.72
SMPD3-211ENST00000568373 RTN2O75298 545 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 EDN1P05305 212 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 MYBL2P10244 700 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 CYP2C8P10632 490 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 GZMAP12544 262 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 CYP11B1P15538 503 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 HADHBP55084 474 aaKnown RBP19.53■□□□□ 0.72
SMPD3-211ENST00000568373 ZACNQ401N2 412 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 TAF3Q5VWG9 929 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 IER5Q5VY09 327 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 GTF3C2Q8WUA4 911 aaPredicted RBP19.53■□□□□ 0.72
SMPD3-211ENST00000568373 FAM81BQ96LP2 452 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 SPATA33Q96N06 139 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 PCDHB18PQ96TA0 734 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 PI4K2AQ9BTU6 479 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 PDE11AQ9HCR9 933 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 RBAKQ9NYW8 714 aaPredicted RBP19.53■□□□□ 0.72
SMPD3-211ENST00000568373 AMFRQ9UKV5 643 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 ADGRA2Q96PE1 1338 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 TNNI1P19237 187 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 EFNA5P52803 228 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 WNT7BP56706 349 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 SLC7A5Q01650 507 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 TCEAL1Q15170 157 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 FAM84AQ96KN4 292 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 CALR3Q96L12 384 aaKnown RBP19.53■□□□□ 0.72
SMPD3-211ENST00000568373 ACP6Q9NPH0 428 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 PRDM10Q9NQV6 1147 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 C1orf112Q9NSG2 853 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 TMEM59LQ9UK28 342 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 COG5Q9UP83 839 aa19.53■□□□□ 0.72
SMPD3-211ENST00000568373 ZBTB42B2RXF5 422 aa19.52■□□□□ 0.72
SMPD3-211ENST00000568373 CEP104O60308 925 aa19.52■□□□□ 0.72
SMPD3-211ENST00000568373 C4BPAP04003 597 aaKnown RBP19.52■□□□□ 0.72
SMPD3-211ENST00000568373 PDE6CP51160 858 aa19.52■□□□□ 0.72
SMPD3-211ENST00000568373 RNASE9P60153 205 aaKnown RBP19.52■□□□□ 0.72
SMPD3-211ENST00000568373 MRPS25P82663 173 aaKnown RBP19.52■□□□□ 0.72
SMPD3-211ENST00000568373 FMO1Q01740 532 aa19.52■□□□□ 0.72
SMPD3-211ENST00000568373 LMBRD2Q68DH5 695 aaPredicted RBP19.52■□□□□ 0.72
SMPD3-211ENST00000568373 ZPBP2Q6X784 338 aa19.52■□□□□ 0.72
SMPD3-211ENST00000568373 PNMA8AQ86V59 439 aaPredicted RBP19.52■□□□□ 0.72
SMPD3-211ENST00000568373 EXOC8Q8IYI6 725 aa19.52■□□□□ 0.72
SMPD3-211ENST00000568373 TCP11Q8WWU5 503 aa19.52■□□□□ 0.72
SMPD3-211ENST00000568373 DHX38Q92620 1227 aaKnown RBP19.52■□□□□ 0.72
SMPD3-211ENST00000568373 ELMO3Q96BJ8 720 aa19.52■□□□□ 0.72
SMPD3-211ENST00000568373 EFCC1Q9HA90 598 aa19.52■□□□□ 0.72
SMPD3-211ENST00000568373 FAM170AA1A519 330 aa19.52■□□□□ 0.71
SMPD3-211ENST00000568373 ASB14A6NK59 587 aa19.52■□□□□ 0.71
SMPD3-211ENST00000568373 MMEP08473 750 aa19.52■□□□□ 0.71
SMPD3-211ENST00000568373 TXNP10599 105 aaKnown RBP19.52■□□□□ 0.71
SMPD3-211ENST00000568373 OAS2P29728 719 aaKnown RBP19.52■□□□□ 0.71
SMPD3-211ENST00000568373 GPC5P78333 572 aa19.52■□□□□ 0.71
SMPD3-211ENST00000568373 CDR2Q01850 454 aa19.52■□□□□ 0.71
SMPD3-211ENST00000568373 GPS2Q13227 327 aa19.52■□□□□ 0.71
SMPD3-211ENST00000568373 PLCB4Q15147 1175 aa19.52■□□□□ 0.71
SMPD3-211ENST00000568373 ZBTB41Q5SVQ8 909 aa19.52■□□□□ 0.71
SMPD3-211ENST00000568373 TDRD10Q5VZ19 366 aaKnown RBP19.52■□□□□ 0.71
SMPD3-211ENST00000568373 GSPT2Q8IYD1 628 aaKnown RBP19.52■□□□□ 0.71
SMPD3-211ENST00000568373 VIPAS39Q9H9C1 493 aa19.52■□□□□ 0.71
SMPD3-211ENST00000568373 PTPRJQ12913 1337 aa19.51■□□□□ 0.71
SMPD3-211ENST00000568373 IGKV6-21A0A0C4DH24 114 aa19.51■□□□□ 0.71
SMPD3-211ENST00000568373 PGRMC1O00264 195 aaKnown RBP19.51■□□□□ 0.71
SMPD3-211ENST00000568373 HLA-DRAP01903 254 aa19.51■□□□□ 0.71
SMPD3-211ENST00000568373 SLC26A2P50443 739 aa19.51■□□□□ 0.71
SMPD3-211ENST00000568373 MKRN4PQ13434 485 aaPredicted RBP19.51■□□□□ 0.71
SMPD3-211ENST00000568373 MXD4Q14582 209 aaPredicted RBP19.51■□□□□ 0.71
SMPD3-211ENST00000568373 TTLL4Q14679 1199 aa19.51■□□□□ 0.71
SMPD3-211ENST00000568373 CDCA2Q69YH5 1023 aaPredicted RBP19.51■□□□□ 0.71
SMPD3-211ENST00000568373 AENQ8WTP8 325 aaKnown RBP19.51■□□□□ 0.71
SMPD3-211ENST00000568373 COPS5Q92905 334 aa19.51■□□□□ 0.71
SMPD3-211ENST00000568373 HINFPQ9BQA5 517 aa19.51■□□□□ 0.71
SMPD3-211ENST00000568373 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.51■□□□□ 0.71
SMPD3-211ENST00000568373 CCDC113Q9H0I3 377 aa19.51■□□□□ 0.71
SMPD3-211ENST00000568373 UNCXA6NJT0 531 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 TNFRSF8P28908 595 aa19.5■□□□□ 0.71
SMPD3-211ENST00000568373 TNNT3P45378 269 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms