RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 UBN1Q9NPG3 1134 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 GPRC5CQ9NQ84 441 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 ENTPD7Q9NQZ7 604 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 TMEM63CQ9P1W3 806 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 KANSL3Q9P2N6 904 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 GIT1Q9Y2X7 761 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 PCDHB6Q9Y5E3 794 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 HELZP42694 1942 aaKnown RBP7.6□□□□□ -1.19
SPG11-224ENST00000561268 PHLPP2Q6ZVD8 1323 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 DYNC1I1O14576 645 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 B4GALT5O43286 388 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 MARCH6O60337 910 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 CLASP2O75122 1294 aaKnown RBP7.6□□□□□ -1.19
SPG11-224ENST00000561268 F13A1P00488 732 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 C1RP00736 705 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 SRGAP2CP0DJJ0 459 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 SRGAP2BP0DMP2 458 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 COL9A1P20849 921 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 MLH1P40692 756 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 TECP42680 631 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 ALDH7A1P49419 539 aaKnown RBP7.6□□□□□ -1.19
SPG11-224ENST00000561268 KRT17Q04695 432 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 GRIK3Q13003 919 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 PKP1Q13835 747 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 PDIA5Q14554 519 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 IL17AQ16552 155 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 RILPL1Q5EBL4 403 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 TMEM31Q5JXX7 168 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 SLC27A1Q6PCB7 646 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 ZNF280BQ86YH2 543 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 DAW1Q8N136 415 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 RNF169Q8NCN4 708 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 ERMNQ8TAM6 284 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 URGCPQ8TCY9 931 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 SLC22A17Q8WUG5 538 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 CASP10Q92851 521 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 SCAND2PQ9GZW5 306 aaPredicted RBP7.6□□□□□ -1.19
SPG11-224ENST00000561268 RBSNQ9H1K0 784 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 C2orf40Q9H1Z8 148 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 PDZD7Q9H5P4 517 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 PRMT7Q9NVM4 692 aaPredicted RBP7.6□□□□□ -1.19
SPG11-224ENST00000561268 DZANK1Q9NVP4 752 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 ARHGAP28Q9P2N2 729 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 PUF60Q9UHX1 559 aaKnown RBP7.6□□□□□ -1.19
SPG11-224ENST00000561268 KIF3AQ9Y496 699 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 PCDHGA4Q9Y5G9 962 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 STK24Q9Y6E0 443 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 ANAPC1Q9H1A4 1944 aa7.6□□□□□ -1.19
SPG11-224ENST00000561268 KIAA1549LQ6ZVL6 1849 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 ZNF638Q14966 1978 aaKnown RBP7.59□□□□□ -1.19
SPG11-224ENST00000561268 ARL5CA6NH57 179 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 NT5C1B-RDH14C9J2C7 533 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 TMEM189-UBE2V1I3L0A0 370 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 INO80B-WBP1J3KQ70 363 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 ABLIM1O14639 778 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 PTGESO14684 152 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 PER2O15055 1255 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 SLC26A4O43511 780 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 CSPG5O95196 566 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 SOD2P04179 222 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 ALADP13716 330 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 IBSPP21815 317 aaPredicted RBP7.59□□□□□ -1.19
SPG11-224ENST00000561268 ITIH3Q06033 890 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 PTGDRQ13258 359 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 DHX8Q14562 1220 aaKnown RBP7.59□□□□□ -1.19
SPG11-224ENST00000561268 PPP2R5AQ15172 486 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 ZNF174Q15697 407 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 CLUL1Q15846 466 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 ARL6IP4Q66PJ3 421 aaKnown RBP7.59□□□□□ -1.19
SPG11-224ENST00000561268 KIAA1841Q6NSI8 718 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 PADI6Q6TGC4 694 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 TAS1R3Q7RTX0 852 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 RBM23Q86U06 439 aaKnown RBP7.59□□□□□ -1.19
SPG11-224ENST00000561268 RNF135Q8IUD6 432 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 VPS52Q8N1B4 723 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 CMASQ8NFW8 434 aaPredicted RBP7.59□□□□□ -1.19
SPG11-224ENST00000561268 KIFAP3Q92845 792 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 CPB2Q96IY4 423 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 ZFP42Q96MM3 310 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 CCDC43Q96MW1 224 aaKnown RBP7.59□□□□□ -1.19
SPG11-224ENST00000561268 NAP1L5Q96NT1 182 aaPredicted RBP7.59□□□□□ -1.19
SPG11-224ENST00000561268 GAD1Q99259 594 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 IGFLR1Q9H665 355 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 RXFP1Q9HBX9 757 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 CHST7Q9NS84 486 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 MIOSQ9NXC5 875 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 SMC3Q9UQE7 1217 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 INPP5FQ9Y2H2 1132 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 HES2Q9Y543 173 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 MORC2Q9Y6X9 1032 aaPredicted RBP7.59□□□□□ -1.19
SPG11-224ENST00000561268 PIEZO1Q92508 2521 aa7.59□□□□□ -1.19
SPG11-224ENST00000561268 TICRRQ7Z2Z1 1910 aa7.58□□□□□ -1.2
SPG11-224ENST00000561268 MYO16Q9Y6X6 1858 aa7.58□□□□□ -1.2
SPG11-224ENST00000561268 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.58□□□□□ -1.2
SPG11-224ENST00000561268 ARHGEF35A5YM69 484 aa7.58□□□□□ -1.2
SPG11-224ENST00000561268 LRRIQ4A6NIV6 560 aa7.58□□□□□ -1.2
SPG11-224ENST00000561268 PP2D1A8MPX8 630 aa7.58□□□□□ -1.2
SPG11-224ENST00000561268 ACKR2O00590 384 aa7.58□□□□□ -1.2
SPG11-224ENST00000561268 NRP1O14786 923 aa7.58□□□□□ -1.2
SPG11-224ENST00000561268 N4BP3O15049 544 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms