RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CNGA2Q16280 664 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CNOT8Q9UFF9 292 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SLC30A5Q8TAD4 765 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 GJA10Q969M2 543 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TRIM51Q9BSJ1 452 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 MYLK2Q9H1R3 596 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 MARCOQ9UEW3 520 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 GRID1Q9ULK0 1009 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 COMMD3-BMI1R4GMX3 469 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 POLR2MP0CAP2 368 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 MROH9Q5TGP6 573 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 KIAA1586Q9HCI6 787 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TMOD3Q9NYL9 352 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 E2F8A0AVK6 867 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CLDN3O15551 220 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 HSMCR30P0CW71 290 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 RARAP10276 462 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 ICA1Q05084 483 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PIGWQ7Z7B1 504 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 RUBCNLQ9H714 662 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 IP6K2Q9UHH9 426 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 MYRFQ9Y2G1 1151 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 HMOX2P30519 316 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 FBXL13Q8NEE6 735 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SYN2Q92777 582 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 ALKBH8Q96BT7 664 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 DYNLL2Q96FJ2 89 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 VPS39Q96JC1 886 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 NXF1Q9UBU9 619 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 ZBTB11O95625 1053 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SOX5P35711 763 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CCT3P49368 545 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 RARS2Q5T160 578 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 NLRP9Q7RTR0 991 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TSEN2Q8NCE0 465 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CNDP1Q96KN2 507 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TUBE1Q9UJT0 475 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 MYO1GB0I1T2 1018 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PLEKP08567 350 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 HADHAP40939 763 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TAF12Q16514 161 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CAVIN3Q969G5 261 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CCDC124Q96CT7 223 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SNF8Q96H20 258 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 EPN2O95208 641 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 GP5P40197 560 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 ITGA8P53708 1063 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TBX2Q13207 712 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TAF2Q6P1X5 1199 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 MAPKAPK5Q8IW41 473 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CEP72Q9P209 647 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 FAM237BA0A1B0GVD1 139 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CLEC4FQ8N1N0 589 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 HPS3Q969F9 1004 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CCSER1Q9C0I3 900 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 MSX2P35548 267 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF844Q08AG5 666 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 MGAT5Q09328 741 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 C7orf25Q9BPX7 421 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 EXOSC4Q9NPD3 245 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TMEM191CA6NGB0 347 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PIK3R2O00459 728 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 RTN2O75298 545 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PSMG1O95456 288 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TMEM191BP0C7N4 346 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 KNOP1Q1ED39 458 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 C6orf10Q5SRN2 563 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 ANKRD36BP1Q96IX9 119 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CHRM1P11229 460 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 STX5Q13190 355 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 ATP1A4Q13733 1029 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 THOC7Q6I9Y2 204 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CCDC137Q6PK04 289 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 USP38Q8NB14 1042 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 OR9Q1Q8NGQ5 310 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PDCD6IPQ8WUM4 868 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 EPAS1Q99814 870 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 COPRSQ9NQ92 184 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 INPP5AQ14642 412 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 POTEEQ6S8J3 1075 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 CCDC24Q8N4L8 307 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 IRF6O14896 467 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 GAP43P17677 238 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 YWHAHQ04917 246 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 DPYDQ12882 1025 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 REXO1Q8N1G1 1221 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 BBS2Q9BXC9 721 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 RNPEPL1Q9HAU8 725 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 TRPV5Q9NQA5 729 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 AKAP10O43572 662 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 GAS7O60861 476 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 LDHAP00338 332 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 WLSQ5T9L3 541 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 KRT28Q7Z3Y7 464 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 ARHGEF1Q92888 912 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 TMOD4Q9NZQ9 345 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 SMG5Q9UPR3 1016 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 GPC6Q9Y625 555 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 LZTS3O60299 673 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms