RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 SLC25A27O95847 323 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 PGK2P07205 417 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 WEE2P0C1S8 567 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 LINC00271P0C7V0 271 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 ITIH2P19823 946 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 CFPP27918 469 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 HIBADHP31937 336 aaKnown RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 CXCL12P48061 93 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 FNTBP49356 437 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 RGS3P49796 1198 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 CTSWP56202 376 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 ARHGAP4P98171 946 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 UBE3AQ05086 875 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 CHRNDQ07001 517 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 CDK5R2Q13319 367 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 SNW1Q13573 536 aaKnown RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 DOCK1Q14185 1865 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 BTG3Q14201 252 aaPredicted RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 PLS1Q14651 629 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 COG2Q14746 738 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 TCTN1Q2MV58 587 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 PREPLQ4J6C6 727 aaPredicted RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 FAM26DQ5JW98 314 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 SCARA3Q6AZY7 606 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 TCEAL6Q6IPX3 200 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 NFRKBQ6P4R8 1299 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 MAMDC4Q6UXC1 1216 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 CCDC149Q6ZUS6 474 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 MICAL3Q7RTP6 2002 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 LRP10Q7Z4F1 713 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 NLRC5Q86WI3 1866 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 TMEM151BQ8IW70 566 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 DBF4BQ8NFT6 615 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 CMASQ8NFW8 434 aaPredicted RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 PLBD2Q8NHP8 589 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 CCER1Q8TC90 406 aaPredicted RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 XAGE3Q8WTP9 111 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 RSAD2Q8WXG1 361 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 TCEAL3Q969E4 200 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 FANCD2OSQ96PS1 177 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 DUSP23Q9BVJ7 150 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 DNAJC25Q9H1X3 360 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 TNKS2Q9H2K2 1166 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 LTB4R2Q9NPC1 389 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 FOXD3Q9UJU5 478 aaPredicted RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 BRPF3Q9ULD4 1205 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 MAPK8IP1Q9UQF2 711 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 MRPS17Q9Y2R5 130 aaKnown RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 ZNF281Q9Y2X9 895 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 KIF20BQ96Q89 1820 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 ZNF236Q9UL36 1845 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 GOLGA4Q13439 2230 aaKnown RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 MIA3Q5JRA6 1907 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 SIPA1L3O60292 1781 aaPredicted RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 PHLPP2Q6ZVD8 1323 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 EMSYQ7Z589 1322 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 APCP25054 2843 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 PATJQ8NI35 1801 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 DDTLA6NHG4 134 aaPredicted RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 E9PAM4 449 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 SNAP23O00161 211 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 ADCY6O43306 1168 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 SYNCRIPO60506 623 aaKnown RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 GADD45BO75293 160 aaPredicted RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 TAF5LO75529 589 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 GSTP1P09211 210 aaKnown RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 CKBP12277 381 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 KRT10P13645 584 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 EIF2S2P20042 333 aaKnown RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 CYP7A1P22680 504 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 GDNFP39905 211 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 DCTP40126 519 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 USP14P54578 494 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 OXCT1P55809 520 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 TLE1Q04724 770 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 CHAF1AQ13111 956 aaPredicted RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 MLF2Q15773 248 aaPredicted RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 PTGISQ16647 500 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 SLC44A4Q53GD3 710 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 RARS2Q5T160 578 aaKnown RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 PEAR1Q5VY43 1037 aaPredicted RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 PDXDC1Q6P996 788 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 DTHD1Q6ZMT9 781 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 TTLL10Q6ZVT0 673 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 TAOK1Q7L7X3 1001 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 PIP4P1Q86T03 277 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 TLK2Q86UE8 772 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 TOP6BLQ8N6T0 577 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 MAGEB6Q8N7X4 407 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 MB21D1Q8N884 522 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 RNF214Q8ND24 703 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 TTLL11Q8NHH1 800 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 PNISRQ8TF01 805 aaKnown RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 TRIM56Q9BRZ2 755 aaKnown RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 MTG1Q9BT17 334 aaPredicted RBP2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 PI4K2AQ9BTU6 479 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 IDI2Q9BXS1 227 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 CSRNP2Q9H175 543 aa2.71□□□□□ -1.98
TRAV1-1-201ENST00000542354 GREM2Q9H772 168 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms