RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 PTPN21Q16825 1174 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 SLC10A6Q3KNW5 377 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 DCAF4L1Q3SXM0 396 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 CBWD6Q4V339 395 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 XKR4Q5GH76 650 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 CBWD3Q5JTY5 395 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 CBWD5Q5RIA9 395 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 NOTUMQ6P988 496 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 SLC27A1Q6PCB7 646 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 ALKAL1Q6UXT8 129 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 INTS8Q75QN2 995 aaKnown RBP9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 MRPL10Q7Z7H8 261 aaKnown RBP9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 ZBTB33Q86T24 672 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 USP38Q8NB14 1042 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 LMO3Q8TAP4 145 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 CXorf38Q8TB03 319 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 FAM84AQ96KN4 292 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 SCLT1Q96NL6 688 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 TMEM106CQ9BVX2 250 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 TTYH3Q9C0H2 523 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 VPS16Q9H269 839 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 CXCL16Q9H2A7 254 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 CHST12Q9NRB3 414 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 TOPORSQ9NS56 1045 aaPredicted RBP9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 NOD1Q9Y239 953 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 COQ4Q9Y3A0 265 aa9.28□□□□□ -0.92
PMS2P3-208ENST00000533167 MYH11P35749 1972 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 GTPBP10A4D1E9 387 aaKnown RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 TRIM43BA6NCK2 446 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 ZNF233A6NK53 670 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 M0QZ92 97 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 RNF225M0QZC1 329 aaPredicted RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 KIAA0355O15063 1070 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 ZNF623O75123 536 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 NPTXRO95502 500 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 LDHAP00338 332 aaKnown RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 SERPINC1P01008 464 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 C4BPAP04003 597 aaKnown RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 CLTAP09496 248 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 STAG3L1P0CL83 205 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 CDK11BP21127 795 aaKnown RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 MTIF2P46199 727 aaKnown RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 FAM189BP81408 668 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 BFSP2Q13515 415 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 CCDC40Q4G0X9 1142 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 PLEKHG4Q58EX7 1191 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 NECAB2Q7Z6G3 386 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 ZNF598Q86UK7 904 aaKnown RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 EFCAB13Q8IY85 973 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 THNSL1Q8IYQ7 743 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 CRIPAKQ8N1N5 446 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 RDH13Q8NBN7 331 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 TRIM43Q96BQ3 446 aaPredicted RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 POP1Q99575 1024 aaKnown RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 CGRRF1Q99675 332 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 TRIM5Q9C035 493 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 TMEM117Q9H0C3 514 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 RNF39Q9H2S5 420 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 NXF3Q9H4D5 531 aaKnown RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 PDE11AQ9HCR9 933 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 SIX2Q9NPC8 291 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 MAGEC2Q9UBF1 373 aaPredicted RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 PIN4Q9Y237 131 aaKnown RBP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 FRMD4BQ9Y2L6 1034 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 ITIH6Q6UXX5 1313 aa9.27□□□□□ -0.93
PMS2P3-208ENST00000533167 MEIS3P2A8K0S8 358 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 DCDC2CA8MYV0 355 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 C9IYK1 514 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 EPHB6O15197 1021 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 GPR182O15218 404 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 INPPL1O15357 1258 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 TLR3O15455 904 aaKnown RBP9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 CBFA2T2O43439 604 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 LRRN2O75325 713 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 NOL4O94818 638 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 AFPP02771 609 aaKnown RBP9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 CLTBP09497 229 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 CXCL8P10145 99 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 HARSP12081 509 aaKnown RBP9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 GTF2H1P32780 548 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 CYP2C18P33260 490 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 FMO5P49326 533 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 KLK7P49862 253 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 SYCP1Q15431 976 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 ZBTB6Q15916 424 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 KYAT1Q16773 422 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 EPC2Q52LR7 807 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 FAM43BQ6ZT52 329 aaPredicted RBP9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 SV2AQ7L0J3 742 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 TMEM130Q8N3G9 435 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 GSTCDQ8NEC7 633 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 OR5B17Q8NGF7 314 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 SNX27Q96L92 541 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 ZMAT2Q96NC0 199 aaKnown RBP9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 HIPK3Q9H422 1215 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 RNF19AQ9NV58 838 aa9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 RBAKQ9NYW8 714 aaPredicted RBP9.26□□□□□ -0.93
PMS2P3-208ENST00000533167 HES2Q9Y543 173 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms