RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CACNA2D1P54289 1103 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 FAM196AQ6ZSG2 479 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 SLFN11Q7Z7L1 901 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 VPS52Q8N1B4 723 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 PPM1KQ8N3J5 372 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 ARHGEF1Q92888 912 aaKnown RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 MCUR1Q96AQ8 359 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 CCDC127Q96BQ5 260 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 ACSF2Q96CM8 615 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 GBP5Q96PP8 586 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 NAP1L3Q99457 506 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 STMN4Q9H169 189 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 DNAJC18Q9H819 358 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 FBXO6Q9NRD1 293 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 CYP39A1Q9NYL5 469 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 ANAPC5Q9UJX4 755 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 NUMBLQ9Y6R0 609 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 SIPA1L3O60292 1781 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 DCCP43146 1447 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 PASKQ96RG2 1323 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 CCDC160A6NGH7 325 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 PPP1R11O60927 126 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-208ENST00000504387 USP1O94782 785 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 SGPL1O95470 568 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 IFNB1P01574 187 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 ALADP13716 330 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 ETS1P14921 441 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 FERP16591 822 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 TAF1P21675 1872 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 RPA3P35244 121 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-208ENST00000504387 FXR2P51116 673 aaKnown RBP eCLIP8.13□□□□□ -1.119e-8■■□□□ 11.8
NEDD9-208ENST00000504387 NEK3P51956 506 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 NOP14P78316 857 aaKnown RBP8.13□□□□□ -1.11
NEDD9-208ENST00000504387 GPSM2P81274 684 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 GIT2Q14161 759 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 FASTKD3Q14CZ7 662 aaKnown RBP8.13□□□□□ -1.11
NEDD9-208ENST00000504387 SMAD1Q15797 465 aaKnown RBP8.13□□□□□ -1.11
NEDD9-208ENST00000504387 PKN2Q16513 984 aaKnown RBP8.13□□□□□ -1.11
NEDD9-208ENST00000504387 PHLDB3Q6NSJ2 640 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 ASRGL1Q7L266 308 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 AMIGO3Q86WK7 504 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 ADGRF4Q8IZF3 695 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 CLPTM1LQ96KA5 538 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 CARD9Q9H257 536 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 AAASQ9NRG9 546 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 SCOCQ9UIL1 159 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 ZFP69BQ9UJL9 534 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 MTUS1Q9ULD2 1270 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 DNM3Q9UQ16 869 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 R3HDM2Q9Y2K5 976 aaKnown RBP8.13□□□□□ -1.11
NEDD9-208ENST00000504387 EXOC1LA0A1B0GW35 172 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 FAM187AA6NFU0 413 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 PI4K2BG5E9Z4 385 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 CYP26A1O43174 497 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 GJB6O95452 261 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 FGRP09769 529 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 EEF2P13639 858 aaKnown RBP8.13□□□□□ -1.11
NEDD9-208ENST00000504387 CHRNA3P32297 505 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 CCNFP41002 786 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 IL9RQ01113 521 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 DEUP1Q05D60 604 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 SLMAPQ14BN4 828 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 SF3B3Q15393 1217 aaKnown RBP8.13□□□□□ -1.11
NEDD9-208ENST00000504387 TRAPPC3LQ5T215 181 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 C10orf76Q5T2E6 689 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 HHATQ5VTY9 493 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 FOXB2Q5VYV0 432 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 PPP4R3CPQ6ZMV5 832 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 ILDR2Q71H61 639 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 GBP7Q8N8V2 638 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-208ENST00000504387 ZNF653Q96CK0 615 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 HERPUD2Q9BSE4 406 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 NUP85Q9BW27 656 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 TXLNGQ9NUQ3 528 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 GGA1Q9UJY5 639 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 PCDHA2Q9Y5H9 948 aa8.13□□□□□ -1.11
NEDD9-208ENST00000504387 TXNDC9O14530 226 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 CALUO43852 315 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 FAM13AO94988 1023 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 GDF11O95390 407 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 KITP10721 976 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 LMNB1P20700 586 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 ATP6V1C1P21283 382 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 RASSF2P50749 326 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 DHX34Q14147 1143 aaKnown RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 SEPT2Q15019 361 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 TMEM119Q4V9L6 283 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 GALNT17Q6IS24 598 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 ARHGEF18Q6ZSZ5 1173 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 TTC7BQ86TV6 843 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 SLC13A5Q86YT5 568 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 ARHGEF19Q8IW93 802 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 PDCD7Q8N8D1 485 aaKnown RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 DAGLBQ8NCG7 672 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 WDR60Q8WVS4 1066 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 SAYSD1Q9NPB0 183 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 GRID1Q9ULK0 1009 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 PCDHA1Q9Y5I3 950 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 DUOX1Q9NRD9 1551 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms