RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PRLRP16471 622 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 SV2AQ7L0J3 742 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 TRIM50Q86XT4 487 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 ATP8B4Q8TF62 1192 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 PLVAPQ9BX97 442 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 CALN1Q9BXU9 219 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 NKIRAS1Q9NYS0 192 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 SLC27A3Q5K4L6 730 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 DCAF12L1Q5VU92 463 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 KRT39Q6A163 491 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 TRIM68Q6AZZ1 485 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 VSIG1Q86XK7 387 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 SULF1Q8IWU6 871 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 CTAGE3PQ8IX95 158 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 FBXL13Q8NEE6 735 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 CERKQ8TCT0 537 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 POLR3FQ9H1D9 316 aaPredicted RBP14.38□□□□□ -0.11
GPC1-209ENST00000495100 TMBIM4Q9HC24 238 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 SAYSD1Q9NPB0 183 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 GAS8O95995 478 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 GJB1P08034 283 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 PPP1R21Q6ZMI0 780 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 CCDC197Q8NCU1 140 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 HVCN1Q96D96 273 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 MSTO1Q9BUK6 570 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 DDX20Q9UHI6 824 aaKnown RBP14.38□□□□□ -0.11
GPC1-209ENST00000495100 DCTN4Q9UJW0 460 aa14.38□□□□□ -0.11
GPC1-209ENST00000495100 ADAMTS7Q9UKP4 1686 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 CFHP08603 1231 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 CETN2P41208 172 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 ORC2Q13416 577 aaPredicted RBP14.37□□□□□ -0.11
GPC1-209ENST00000495100 DAW1Q8N136 415 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 APOL6Q9BWW8 343 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 TMEM206Q9H813 350 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 RAB20Q9NX57 234 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 INTUQ9ULD6 942 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 CYP3A7-CYP3A51PA0A087WV96 503 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 NOP56O00567 594 aaKnown RBP14.37□□□□□ -0.11
GPC1-209ENST00000495100 TLR3O15455 904 aaKnown RBP14.37□□□□□ -0.11
GPC1-209ENST00000495100 NR3C2P08235 984 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 BRAFP15056 766 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 CYP11B1P15538 503 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 Q4G0T1 1027 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 POLR3CQ9BUI4 534 aaPredicted RBP14.37□□□□□ -0.11
GPC1-209ENST00000495100 SUCLA2Q9P2R7 463 aaPredicted RBP14.37□□□□□ -0.11
GPC1-209ENST00000495100 EXOC7Q9UPT5 735 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
GPC1-209ENST00000495100 IGLV3-22A0A075B6J6 115 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 TMEM253P0C7T8 217 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 NOP14P78316 857 aaKnown RBP14.37□□□□□ -0.11
GPC1-209ENST00000495100 MAPK7Q13164 816 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 ZBTB41Q5SVQ8 909 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 GADL1Q6ZQY3 521 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 SYN2Q92777 582 aaPredicted RBP14.37□□□□□ -0.11
GPC1-209ENST00000495100 TUFT1Q9NNX1 390 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 TMX2Q9Y320 296 aa14.37□□□□□ -0.11
GPC1-209ENST00000495100 GRIN2DO15399 1336 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 IRS2Q9Y4H2 1338 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 TULP2O00295 520 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 KRT1P04264 644 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 MYBL1P10243 752 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 PLS3P13797 630 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 CAP2P40123 477 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 CXCL9Q07325 125 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 TTC27Q6P3X3 843 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 RSBN1LQ6PCB5 846 aaPredicted RBP14.36□□□□□ -0.11
GPC1-209ENST00000495100 PRELID2Q8N945 189 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 LRRC57Q8N9N7 239 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 NETO2Q8NC67 525 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 PIK3R5Q8WYR1 880 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 HSPH1Q92598 858 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 C12orf65Q9H3J6 166 aaKnown RBP14.36□□□□□ -0.11
GPC1-209ENST00000495100 ZC3H4Q9UPT8 1303 aaKnown RBP14.36□□□□□ -0.11
GPC1-209ENST00000495100 E2F8A0AVK6 867 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 WNT10BO00744 389 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 ZNF131P52739 623 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 ITGA8P53708 1063 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 CNTN2Q02246 1040 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 ZBTB16Q05516 673 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 BBS9Q3SYG4 887 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 ZC3H18Q86VM9 953 aaKnown RBP14.36□□□□□ -0.11
GPC1-209ENST00000495100 RHOT2Q8IXI1 618 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 PLEKHO2Q8TD55 490 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 SYTL5Q8TDW5 730 aaPredicted RBP14.36□□□□□ -0.11
GPC1-209ENST00000495100 CAVIN3Q969G5 261 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 MKL1Q969V6 931 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 MTFR1LQ9H019 292 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 WDR64B1ANS9 1081 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 GH1P01241 217 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 CHKAP35790 457 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 GCLCP48506 637 aaPredicted RBP14.36□□□□□ -0.11
GPC1-209ENST00000495100 BASP1P80723 227 aaKnown RBP14.36□□□□□ -0.11
GPC1-209ENST00000495100 TRAPPC12Q8WVT3 735 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 KREMEN1Q96MU8 473 aa14.36□□□□□ -0.11
GPC1-209ENST00000495100 LOC102724159A0A0B4J2E5 919 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 TMEM120BA0PK00 339 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 NRLP54845 237 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 PWP2Q15269 919 aaKnown RBP14.35□□□□□ -0.11
GPC1-209ENST00000495100 SPRED3Q2MJR0 410 aa14.35□□□□□ -0.11
GPC1-209ENST00000495100 SESTD1Q86VW0 696 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms