RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CGRRF1Q99675 332 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 PTPN18Q99952 460 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 VRK1Q99986 396 aaPredicted RBP5.04□□□□□ -1.6
CLK1-213ENST00000492793 FAM204AQ9H8W3 233 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 ARMT1Q9H993 441 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 MAN1C1Q9NR34 630 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 HDAC5Q9UQL6 1122 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 SIK3Q9Y2K2 1263 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 PCDHB1Q9Y5F3 818 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 PCDHA3Q9Y5H8 950 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 NR2E3Q9Y5X4 410 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 ACTL7AQ9Y615 435 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 DUSP10Q9Y6W6 482 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 OTOL1A6NHN0 477 aaPredicted RBP5.03□□□□□ -1.6
CLK1-213ENST00000492793 H3BUI4 141 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 ALDH2P05091 517 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 IL2RBP14784 551 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 MAP2K6P52564 334 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 CREMQ03060 361 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 TARDBPQ13148 414 aaKnown RBP eCLIP5.03□□□□□ -1.6
CLK1-213ENST00000492793 ATP2B3Q16720 1220 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 FAM214AQ32MH5 1076 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 FAM111BQ6SJ93 734 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 CCDC149Q6ZUS6 474 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 ADGRE4PQ86SQ3 457 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 DAAM2Q86T65 1068 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 C1QL4Q86Z23 238 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 C3orf20Q8ND61 904 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 CFHR4Q92496 578 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 HOXB13Q92826 284 aaPredicted RBP5.03□□□□□ -1.6
CLK1-213ENST00000492793 RUNDC1Q96C34 613 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 FAM193BQ96PV7 902 aaPredicted RBP5.03□□□□□ -1.6
CLK1-213ENST00000492793 ADAM7Q9H2U9 754 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 SEC61A2Q9H9S3 476 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 MOCS1Q9NZB8 636 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 FAM50BQ9Y247 325 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 POLHQ9Y253 713 aa5.03□□□□□ -1.6
CLK1-213ENST00000492793 MATN2O00339 956 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 SGTAO43765 313 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 PLIN1O60240 522 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 STC2O76061 302 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 UBXN7O94888 489 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 FPR1P21462 350 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 HTR1BP28222 390 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 RAP2BP61225 183 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 DSC2Q02487 901 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 PTH1RQ03431 593 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 GRM7Q14831 915 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 RAB39AQ14964 217 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 AFMIDQ63HM1 303 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 SLFN13Q68D06 897 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 GLB1LQ6UWU2 654 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 XYLT1Q86Y38 959 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 GPR135Q8IZ08 494 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 ZGPATQ8N5A5 531 aaKnown RBP5.02□□□□□ -1.61
CLK1-213ENST00000492793 LILRA3Q8N6C8 439 aaPredicted RBP5.02□□□□□ -1.61
CLK1-213ENST00000492793 CDK5RAP3Q96JB5 506 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 PLA2G12BQ9BX93 195 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 AGO3Q9H9G7 860 aaKnown RBP5.02□□□□□ -1.61
CLK1-213ENST00000492793 SPON1Q9HCB6 807 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 LMBRD1Q9NUN5 540 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 ABCF2Q9UG63 623 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 STXBP5LQ9Y2K9 1186 aa5.02□□□□□ -1.61
CLK1-213ENST00000492793 H3BML4 177 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 KIAA0391O15091 583 aaKnown RBP5.01□□□□□ -1.61
CLK1-213ENST00000492793 SLC16A6O15403 523 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 TEX33O43247 280 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 AMY1AP04745 511 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 MYL1P05976 194 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 NBPF7P0C2Y1 421 aaPredicted RBP5.01□□□□□ -1.61
CLK1-213ENST00000492793 GNAT2P19087 354 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 PCSK1P29120 753 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 RPS19P39019 145 aaKnown RBP5.01□□□□□ -1.61
CLK1-213ENST00000492793 ALDH1A3P47895 512 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 ZNF280AP59817 542 aaPredicted RBP5.01□□□□□ -1.61
CLK1-213ENST00000492793 ADAM8P78325 824 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 NOGQ13253 232 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 FKBP15Q5T1M5 1219 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 LCNL1Q6ZST4 164 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 HEATR3Q7Z4Q2 680 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 KLHDC4Q8TBB5 520 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 NSUN6Q8TEA1 469 aaKnown RBP5.01□□□□□ -1.61
CLK1-213ENST00000492793 CEP95Q96GE4 821 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 ZNF512Q96ME7 567 aaPredicted RBP5.01□□□□□ -1.61
CLK1-213ENST00000492793 KCNC2Q96PR1 638 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 CPPED1Q9BRF8 314 aaPredicted RBP5.01□□□□□ -1.61
CLK1-213ENST00000492793 PCGF6Q9BYE7 350 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 B3GNT5Q9BYG0 378 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 NELFAQ9H3P2 528 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 GOLGA2P5Q9HBQ8 144 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 SLAMF7Q9NQ25 335 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 STAP2Q9UGK3 403 aa5.01□□□□□ -1.61
CLK1-213ENST00000492793 FEZ2Q9UHY8 353 aaPredicted RBP5.01□□□□□ -1.61
CLK1-213ENST00000492793 BTBD11A6QL63 1104 aa5□□□□□ -1.61
CLK1-213ENST00000492793 HOXA3O43365 443 aaPredicted RBP5□□□□□ -1.61
CLK1-213ENST00000492793 B3GALT2O43825 422 aa5□□□□□ -1.61
CLK1-213ENST00000492793 ARIH2O95376 493 aa5□□□□□ -1.61
CLK1-213ENST00000492793 ATP5JP18859 108 aa5□□□□□ -1.61
CLK1-213ENST00000492793 MSX2P35548 267 aaPredicted RBP5□□□□□ -1.61
CLK1-213ENST00000492793 FLT3LGP49771 235 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms