RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 HOXB13Q92826 284 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 BORCS6Q96GS4 357 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 RHOBTB2Q9BYZ6 727 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 KLC2Q9H0B6 622 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 SPON1Q9HCB6 807 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 KLHL42Q9P2K6 505 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 SERPINB13Q9UIV8 391 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 PNMA8BQ9ULN7 279 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 CLCA2Q9UQC9 943 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 MYBBP1AQ9BQG0 1328 aaKnown RBP6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 MUSKO15146 869 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 U2AF1L5P0DN76 240 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 AKAP5P24588 427 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 CYP2C19P33261 490 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 U2AF1Q01081 240 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 CREMQ03060 361 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 IL10RAQ13651 578 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 CNGB1Q14028 1251 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 C3orf36Q3SXR2 165 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 SPATS1Q496A3 300 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 FAM47AQ5JRC9 791 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 RRP12Q5JTH9 1297 aaKnown RBP6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 IFIT1BQ5T764 474 aaKnown RBP6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 GADL1Q6ZQY3 521 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 ZNF572Q7Z3I7 529 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 XYLT1Q86Y38 959 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 KRTAP1-3Q8IUG1 177 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 PALM2Q8IXS6 379 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 RAVER1Q8IY67 606 aaKnown RBP6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 DRC7Q8IY82 874 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 DVL3Q92997 716 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 TMX3Q96JJ7 454 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 CAMKK2Q96RR4 588 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 CDH19Q9H159 772 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 CD248Q9HCU0 757 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 IPPQ9Y573 584 aa6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 CFAP20Q9Y6A4 193 aaKnown RBP6.34□□□□□ -1.39
HMGB1P38-201ENST00000490557 OFD1O75665 1012 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 ATP5JP18859 108 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 HK1P19367 917 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 DDCP20711 480 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 PDCP20941 246 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 SLC6A9P48067 706 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 CDC42EP1Q00587 391 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 MFSD14BQ5SR56 506 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 AFMIDQ63HM1 303 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 MAMDC4Q6UXC1 1216 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 DOK3Q7L591 496 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 PRRT2Q7Z6L0 340 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 TTC7BQ86TV6 843 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 MDGA1Q8NFP4 955 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 CASKIN2Q8WXE0 1202 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 TFAP2CQ92754 450 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 EDAQ92838 391 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 KAT5Q92993 513 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 CEP95Q96GE4 821 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 CLPTM1LQ96KA5 538 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 LRGUKQ96M69 825 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 MAP3K14Q99558 947 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 GPR87Q9BY21 358 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 RTFDC1Q9BY42 306 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 MAN1C1Q9NR34 630 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 POGKQ9P215 609 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 NOB1Q9ULX3 412 aaKnown RBP6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 RUVBL1Q9Y265 456 aaKnown RBP6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 SIK3Q9Y2K2 1263 aa6.33□□□□□ -1.4
HMGB1P38-201ENST00000490557 GOLGA6L6A8MZA4 724 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 SGTAO43765 313 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 RFPL1O75677 317 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 SCGB1D2O95969 90 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 SNRPA1P09661 255 aaKnown RBP6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 ALOX15P16050 662 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 HSPA6P17066 643 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 MGAT1P26572 445 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 MAN2A2P49641 1150 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 RAP2BP61225 183 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 NFE2Q16621 373 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 CCDC157Q569K6 752 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 THEMIS2Q5TEJ8 643 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 EFCAB12Q6NXP0 572 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 USP45Q70EL2 814 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 CATIPQ7Z7H3 387 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 ZFP28Q8NHY6 868 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 RAB24Q969Q5 203 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 PGBD4Q96DM1 585 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 ACTL7AQ9Y615 435 aa6.32□□□□□ -1.4
HMGB1P38-201ENST00000490557 TBKBP1A7MCY6 615 aa6.31□□□□□ -1.4
HMGB1P38-201ENST00000490557 PJA2O43164 708 aa6.31□□□□□ -1.4
HMGB1P38-201ENST00000490557 POU2F2P09086 479 aa6.31□□□□□ -1.4
HMGB1P38-201ENST00000490557 EDNRBP24530 442 aa6.31□□□□□ -1.4
HMGB1P38-201ENST00000490557 GUCY1A2P33402 732 aa6.31□□□□□ -1.4
HMGB1P38-201ENST00000490557 ALDH1A3P47895 512 aa6.31□□□□□ -1.4
HMGB1P38-201ENST00000490557 CLRN1P58418 232 aa6.31□□□□□ -1.4
HMGB1P38-201ENST00000490557 EFEMP1Q12805 493 aa6.31□□□□□ -1.4
HMGB1P38-201ENST00000490557 PGS1Q32NB8 556 aa6.31□□□□□ -1.4
HMGB1P38-201ENST00000490557 DCAF17Q5H9S7 520 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P38-201ENST00000490557 Q6ZSN1 163 aa6.31□□□□□ -1.4
HMGB1P38-201ENST00000490557 TPH2Q8IWU9 490 aa6.31□□□□□ -1.4
HMGB1P38-201ENST00000490557 GRAMD1CQ8IYS0 662 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms