RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 MAMSTRQ6ZN01 415 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 RTL10Q7L3V2 364 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 TCP11Q8WWU5 503 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 SLC5A5Q92911 643 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 LENG9Q96B70 501 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 CCDC136Q96JN2 1154 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 B3GALT6Q96L58 329 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 GAD1Q99259 594 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 C22orf23Q9BZE7 217 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 HEBP1Q9NRV9 189 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 NDRG2Q9UN36 371 aaKnown RBP8.54□□□□□ -1.04
PDPN-205ENST00000487038 GIT1Q9Y2X7 761 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 HELZ2Q9BYK8 2649 aaKnown RBP8.54□□□□□ -1.04
PDPN-205ENST00000487038 NUP210Q8TEM1 1887 aaPredicted RBP8.53□□□□□ -1.04
PDPN-205ENST00000487038 TMEM150BA6NC51 233 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 DDX11L8A8MPP1 907 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 SLC27A2O14975 620 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 ASAP2O43150 1006 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 SRGAP2CP0DJJ0 459 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 PMLP29590 882 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 RFC5P40937 340 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 USP11P51784 963 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 LIMK1P53667 647 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 PSMC5P62195 406 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 NTHL1P78549 312 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 AKAP17AQ02040 695 aaKnown RBP8.53□□□□□ -1.04
PDPN-205ENST00000487038 FUT2Q10981 343 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 ELAVL2Q12926 359 aaKnown RBP8.53□□□□□ -1.04
PDPN-205ENST00000487038 HSP90AA2PQ14568 343 aaPredicted RBP8.53□□□□□ -1.04
PDPN-205ENST00000487038 UVSSAQ2YD98 709 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 C1orf228Q6PIY5 440 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 PRSS55Q6UWB4 352 aaPredicted RBP8.53□□□□□ -1.04
PDPN-205ENST00000487038 NPAS3Q8IXF0 933 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 C12orf50Q8NA57 414 aaPredicted RBP8.53□□□□□ -1.04
PDPN-205ENST00000487038 SMG8Q8ND04 991 aaKnown RBP8.53□□□□□ -1.04
PDPN-205ENST00000487038 SLC7A14Q8TBB6 771 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 PIK3R5Q8WYR1 880 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 IRF7Q92985 503 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 ELSPBP1Q96BH3 223 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 ZFP42Q96MM3 310 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 CEP89Q96ST8 783 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 SH2D3AQ9BRG2 576 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 TTPALQ9BTX7 342 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 APOL6Q9BWW8 343 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 GPR62Q9BZJ7 368 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 BRD9Q9H8M2 597 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 GDE1Q9NZC3 331 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 MRPS23Q9Y3D9 190 aaKnown RBP8.53□□□□□ -1.04
PDPN-205ENST00000487038 LAMA1P25391 3075 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 NBEAQ8NFP9 2946 aa8.53□□□□□ -1.04
PDPN-205ENST00000487038 SPAG17Q6Q759 2223 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 KIF26AQ9ULI4 1882 aaPredicted RBP8.52□□□□□ -1.05
PDPN-205ENST00000487038 KLF18A0A0U1RQI7 1052 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 F8W810 466 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 PSMD10O75832 226 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 IGHDP01880 384 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 PROS1P07225 676 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 TDGF1P13385 188 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 HOXA11P31270 313 aaPredicted RBP8.52□□□□□ -1.05
PDPN-205ENST00000487038 CXCL12P48061 93 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 LAMTOR4Q0VGL1 99 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 TFDP1Q14186 410 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 LRRC32Q14392 662 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 Q4G0T1 1027 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 RTP2Q5QGT7 225 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 AXDND1Q5T1B0 1012 aaPredicted RBP8.52□□□□□ -1.05
PDPN-205ENST00000487038 CREB3L3Q68CJ9 461 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 PLA2G4FQ68DD2 849 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 ANO5Q75V66 913 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 CEP57Q86XR8 500 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 RNF149Q8NC42 400 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 ITFG1Q8TB96 612 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 PRPF31Q8WWY3 499 aaKnown RBP8.52□□□□□ -1.05
PDPN-205ENST00000487038 MSANTD3Q96H12 275 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 CEP170P1Q96L14 293 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 EIF2AQ9BY44 585 aaKnown RBP8.52□□□□□ -1.05
PDPN-205ENST00000487038 CSRNP2Q9H175 543 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 NAP1L2Q9ULW6 460 aaPredicted RBP8.52□□□□□ -1.05
PDPN-205ENST00000487038 AKAP13Q12802 2813 aa8.52□□□□□ -1.05
PDPN-205ENST00000487038 INO80B-WBP1J3KQ70 363 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 GDF9O60383 454 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 TSPAN1O60635 241 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 LRG1P02750 347 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 CDC27P30260 824 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 QARSP47897 775 aaKnown RBP8.51□□□□□ -1.05
PDPN-205ENST00000487038 FGD1P98174 961 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 TUSC3Q13454 348 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 FZD5Q13467 585 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 MXD4Q14582 209 aaPredicted RBP8.51□□□□□ -1.05
PDPN-205ENST00000487038 EMC2Q15006 297 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 N4BP2L1Q5TBK1 243 aaPredicted RBP8.51□□□□□ -1.05
PDPN-205ENST00000487038 FAM171A1Q5VUB5 890 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 SLC27A1Q6PCB7 646 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 CEP68Q76N32 757 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 OTUD6AQ7L8S5 288 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 FERMT3Q86UX7 667 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 LONP2Q86WA8 852 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 HASPINQ8TF76 798 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 ING5Q8WYH8 240 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 FAM3CQ92520 227 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms