RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 SH3PXD2AQ5TCZ1 1133 aa17.09■□□□□ 0.33
U2AF1-211ENST00000486519 SPEM1Q8N4L4 309 aa17.09■□□□□ 0.33
U2AF1-211ENST00000486519 HASPINQ8TF76 798 aa17.09■□□□□ 0.33
U2AF1-211ENST00000486519 GJA10Q969M2 543 aa17.09■□□□□ 0.33
U2AF1-211ENST00000486519 LZTS2Q9BRK4 669 aa17.09■□□□□ 0.33
U2AF1-211ENST00000486519 IER2Q9BTL4 223 aa17.09■□□□□ 0.33
U2AF1-211ENST00000486519 BRD9Q9H8M2 597 aa17.09■□□□□ 0.33
U2AF1-211ENST00000486519 SUCLA2Q9P2R7 463 aaPredicted RBP17.09■□□□□ 0.33
U2AF1-211ENST00000486519 SAMM50Q9Y512 469 aa17.09■□□□□ 0.33
U2AF1-211ENST00000486519 ATG2BQ96BY7 2078 aa17.08■□□□□ 0.33
U2AF1-211ENST00000486519 MAN2B1O00754 1011 aa17.08■□□□□ 0.32
U2AF1-211ENST00000486519 SOX9P48436 509 aa17.08■□□□□ 0.32
U2AF1-211ENST00000486519 LIN9Q5TKA1 542 aa17.08■□□□□ 0.32
U2AF1-211ENST00000486519 JAKMIP3Q5VZ66 844 aa17.08■□□□□ 0.32
U2AF1-211ENST00000486519 WDR5BQ86VZ2 330 aa17.08■□□□□ 0.32
U2AF1-211ENST00000486519 MAP4K3Q8IVH8 894 aa17.08■□□□□ 0.32
U2AF1-211ENST00000486519 GSTCDQ8NEC7 633 aa17.08■□□□□ 0.32
U2AF1-211ENST00000486519 ELSPBP1Q96BH3 223 aa17.08■□□□□ 0.32
U2AF1-211ENST00000486519 TCEAL4Q96EI5 215 aa17.08■□□□□ 0.32
U2AF1-211ENST00000486519 ZNF334Q9HCZ1 680 aaPredicted RBP17.08■□□□□ 0.32
U2AF1-211ENST00000486519 NRBP2Q9NSY0 501 aa17.08■□□□□ 0.32
U2AF1-211ENST00000486519 MRPS23Q9Y3D9 190 aaKnown RBP17.08■□□□□ 0.32
U2AF1-211ENST00000486519 IPPQ9Y573 584 aa17.08■□□□□ 0.32
U2AF1-211ENST00000486519 CNTNAP5Q8WYK1 1306 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 C4orf47A7E2U8 309 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 HYAL3O43820 417 aaPredicted RBP17.07■□□□□ 0.32
U2AF1-211ENST00000486519 PAPSS2O95340 614 aaPredicted RBP17.07■□□□□ 0.32
U2AF1-211ENST00000486519 RHOP08100 348 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 HOXA9P31269 272 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 ADCY7P51828 1080 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 NAPAP54920 295 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 FAM78AQ5JUQ0 283 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 AXDND1Q5T1B0 1012 aaPredicted RBP17.07■□□□□ 0.32
U2AF1-211ENST00000486519 VITQ6UXI7 678 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 TMTC3Q6ZXV5 915 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 RALYLQ86SE5 291 aaKnown RBP17.07■□□□□ 0.32
U2AF1-211ENST00000486519 ZNF410Q86VK4 478 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 NCOA7Q8NI08 942 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 LNX1Q8TBB1 728 aaPredicted RBP17.07■□□□□ 0.32
U2AF1-211ENST00000486519 EDEM2Q9BV94 578 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 COLEC11Q9BWP8 271 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 APOL6Q9BWW8 343 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 SEPT9Q9UHD8 586 aaPredicted RBP17.07■□□□□ 0.32
U2AF1-211ENST00000486519 ADAM28Q9UKQ2 775 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 KCNH3Q9ULD8 1083 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 NUP205Q92621 2012 aa17.07■□□□□ 0.32
U2AF1-211ENST00000486519 HELZ2Q9BYK8 2649 aaKnown RBP17.06■□□□□ 0.32
U2AF1-211ENST00000486519 CHMP2AO43633 222 aa17.06■□□□□ 0.32
U2AF1-211ENST00000486519 XYLBO75191 536 aa17.06■□□□□ 0.32
U2AF1-211ENST00000486519 FOSP01100 380 aaPredicted RBP17.06■□□□□ 0.32
U2AF1-211ENST00000486519 ITGA4P13612 1032 aa17.06■□□□□ 0.32
U2AF1-211ENST00000486519 IGFBP6P24592 240 aaPredicted RBP17.06■□□□□ 0.32
U2AF1-211ENST00000486519 GDI1P31150 447 aa17.06■□□□□ 0.32
U2AF1-211ENST00000486519 MPLP40238 635 aa17.06■□□□□ 0.32
U2AF1-211ENST00000486519 SART3Q15020 963 aaKnown RBP17.06■□□□□ 0.32
U2AF1-211ENST00000486519 PKN3Q6P5Z2 889 aa17.06■□□□□ 0.32
U2AF1-211ENST00000486519 PDZD3Q86UT5 571 aa17.06■□□□□ 0.32
U2AF1-211ENST00000486519 LENG9Q96B70 501 aa17.06■□□□□ 0.32
U2AF1-211ENST00000486519 DISC1Q9NRI5 854 aa17.06■□□□□ 0.32
U2AF1-211ENST00000486519 TBC1D22BQ9NU19 505 aa17.06■□□□□ 0.32
U2AF1-211ENST00000486519 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
U2AF1-211ENST00000486519 KLK13Q9UKR3 277 aa17.06■□□□□ 0.32
U2AF1-211ENST00000486519 CELSR3Q9NYQ7 3312 aa17.05■□□□□ 0.32
U2AF1-211ENST00000486519 EDIL3O43854 480 aa17.05■□□□□ 0.32
U2AF1-211ENST00000486519 CAPNS1P04632 268 aa17.05■□□□□ 0.32
U2AF1-211ENST00000486519 CYP3A4P08684 503 aa17.05■□□□□ 0.32
U2AF1-211ENST00000486519 CCR2P41597 374 aa17.05■□□□□ 0.32
U2AF1-211ENST00000486519 GNAQP50148 359 aa17.05■□□□□ 0.32
U2AF1-211ENST00000486519 PSMD5Q16401 504 aa17.05■□□□□ 0.32
U2AF1-211ENST00000486519 TXNDC11Q6PKC3 985 aa17.05■□□□□ 0.32
U2AF1-211ENST00000486519 PLEKHM2Q8IWE5 1019 aa17.05■□□□□ 0.32
U2AF1-211ENST00000486519 GPR65Q8IYL9 337 aa17.05■□□□□ 0.32
U2AF1-211ENST00000486519 ZSWIM3Q96MP5 696 aa17.05■□□□□ 0.32
U2AF1-211ENST00000486519 TRMT61BQ9BVS5 477 aaKnown RBP17.05■□□□□ 0.32
U2AF1-211ENST00000486519 INO80BQ9C086 356 aaPredicted RBP17.05■□□□□ 0.32
U2AF1-211ENST00000486519 POLR3BQ9NW08 1133 aaPredicted RBP17.05■□□□□ 0.32
U2AF1-211ENST00000486519 GPSM3Q9Y4H4 160 aa17.05■□□□□ 0.32
U2AF1-211ENST00000486519 SMCO2A6NFE2 343 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 WDR64B1ANS9 1081 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 ARNTLO00327 626 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 SH2B2O14492 632 aaPredicted RBP17.04■□□□□ 0.32
U2AF1-211ENST00000486519 EXTL3O43909 919 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 VIPR2P41587 438 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 PRR16Q569H4 304 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 PRSS36Q5K4E3 855 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 CEP57Q86XR8 500 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 GAB3Q8WWW8 586 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 CPB2Q96IY4 423 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 NIFKQ9BYG3 293 aaKnown RBP17.04■□□□□ 0.32
U2AF1-211ENST00000486519 UNC45AQ9H3U1 944 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 GDE1Q9NZC3 331 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 TCEAL9Q9UHQ7 104 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 MAST4O15021 2626 aa17.04■□□□□ 0.32
U2AF1-211ENST00000486519 ASCC3Q8N3C0 2202 aaKnown RBP17.04■□□□□ 0.32
U2AF1-211ENST00000486519 RPP40O75818 363 aaKnown RBP17.03■□□□□ 0.32
U2AF1-211ENST00000486519 POU2F2P09086 479 aa17.03■□□□□ 0.32
U2AF1-211ENST00000486519 AP3B2Q13367 1082 aa17.03■□□□□ 0.32
U2AF1-211ENST00000486519 COL28A1Q2UY09 1125 aa17.03■□□□□ 0.32
U2AF1-211ENST00000486519 FAM171A1Q5VUB5 890 aa17.03■□□□□ 0.32
U2AF1-211ENST00000486519 PLA2G4FQ68DD2 849 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms