RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ADAM9Q13443 819 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 MUM1L1Q5H9M0 696 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 PPP4R3AQ6IN85 833 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 SWSAP1Q6NVH7 229 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 BTNL9Q6UXG8 535 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 MIGA2Q7L4E1 593 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 MAEAQ7L5Y9 396 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 DPP9Q86TI2 863 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 SMAP1Q8IYB5 467 aaPredicted RBP5.55□□□□□ -1.52
VPS13A-211ENST00000484581 ATXN2LQ8WWM7 1075 aaKnown RBP5.55□□□□□ -1.52
VPS13A-211ENST00000484581 RGMAQ96B86 450 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 PAWRQ96IZ0 340 aaKnown RBP5.55□□□□□ -1.52
VPS13A-211ENST00000484581 TBCBQ99426 244 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 PTPN18Q99952 460 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 SSBP3Q9BWW4 388 aaPredicted RBP5.55□□□□□ -1.52
VPS13A-211ENST00000484581 APOL5Q9BWW9 433 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 GREM2Q9H772 168 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 DMRT3Q9NQL9 472 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 UCKL1Q9NWZ5 548 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 EVLQ9UI08 416 aaPredicted RBP5.55□□□□□ -1.52
VPS13A-211ENST00000484581 CROTQ9UKG9 612 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 A0A0A6YYJ9 748 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 FAM171A2A8MVW0 826 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 FRS3O43559 492 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 PIP5K1CO60331 668 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 NRP2O60462 931 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 B4GALT3O60512 393 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 MAFO75444 373 aaPredicted RBP5.54□□□□□ -1.52
VPS13A-211ENST00000484581 CD53P19397 219 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 GDF5P43026 501 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 GPSM2P81274 684 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 MGAT2Q10469 447 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 DGKKQ5KSL6 1271 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 THEMIS2Q5TEJ8 643 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 ARHGEF18Q6ZSZ5 1173 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 NKAPQ8N5F7 415 aaKnown RBP5.54□□□□□ -1.52
VPS13A-211ENST00000484581 OR2C3Q8N628 320 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 KLHDC4Q8TBB5 520 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 GAB3Q8WWW8 586 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 RIN2Q8WYP3 895 aaPredicted RBP5.54□□□□□ -1.52
VPS13A-211ENST00000484581 CDK5RAP3Q96JB5 506 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 RIPOR3Q96MK2 946 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 ZSWIM3Q96MP5 696 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 TMEM209Q96SK2 561 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 CDK5RAP1Q96SZ6 601 aaKnown RBP5.54□□□□□ -1.52
VPS13A-211ENST00000484581 ADI1Q9BV57 179 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 AMNQ9BXJ7 453 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 DEF6Q9H4E7 631 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 ARFGAP3Q9NP61 516 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 INCENPQ9NQS7 918 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 PPP4R1LQ9P1A2 415 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 FTSJ1Q9UET6 329 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 ANAPC4Q9UJX5 808 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 PNMA2Q9UL42 364 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 NR2E3Q9Y5X4 410 aa5.54□□□□□ -1.52
VPS13A-211ENST00000484581 MORC2Q9Y6X9 1032 aaPredicted RBP5.54□□□□□ -1.52
VPS13A-211ENST00000484581 ZNF839A8K0R7 811 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 FTLP02792 175 aaPredicted RBP5.53□□□□□ -1.52
VPS13A-211ENST00000484581 RPLP2P05387 115 aaKnown RBP5.53□□□□□ -1.52
VPS13A-211ENST00000484581 MYF5P13349 255 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 C6P13671 934 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 RPL17P18621 184 aaKnown RBP5.53□□□□□ -1.52
VPS13A-211ENST00000484581 PRIM2P49643 509 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 CASP5P51878 434 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 MAP2K6P52564 334 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 PPP2CBP62714 309 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 RAB1AP62820 205 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 PPP2CAP67775 309 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 DSC2Q02487 901 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 NOLC1Q14978 699 aaKnown RBP eCLIP5.53□□□□□ -1.52
VPS13A-211ENST00000484581 GJC2Q5T442 439 aaPredicted RBP5.53□□□□□ -1.52
VPS13A-211ENST00000484581 SPRED1Q7Z699 444 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 CIR1Q86X95 450 aaPredicted RBP5.53□□□□□ -1.52
VPS13A-211ENST00000484581 GLB1L2Q8IW92 636 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 GLB1L3Q8NCI6 653 aaPredicted RBP5.53□□□□□ -1.52
VPS13A-211ENST00000484581 HIST1H2AHQ96KK5 128 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 YTHDC1Q96MU7 727 aaKnown RBP5.53□□□□□ -1.52
VPS13A-211ENST00000484581 SCLT1Q96NL6 688 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 WRNIP1Q96S55 665 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 HIST1H2AJQ99878 128 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 CRB3Q9BUF7 120 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 C22orf23Q9BZE7 217 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 WDR12Q9GZL7 423 aaKnown RBP5.53□□□□□ -1.52
VPS13A-211ENST00000484581 GALNT8Q9NY28 637 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 KCMF1Q9P0J7 381 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 SYNPO2Q9UMS6 1093 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 USP18Q9UMW8 372 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 ZDHHC9Q9Y397 364 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 TSC22D4Q9Y3Q8 395 aa5.53□□□□□ -1.52
VPS13A-211ENST00000484581 A0A088AWK7 358 aa5.52□□□□□ -1.53
VPS13A-211ENST00000484581 CFAP69A5D8W1 941 aa5.52□□□□□ -1.53
VPS13A-211ENST00000484581 OVOL3O00110 214 aa5.52□□□□□ -1.53
VPS13A-211ENST00000484581 FOXN3O00409 490 aaPredicted RBP5.52□□□□□ -1.53
VPS13A-211ENST00000484581 SGTAO43765 313 aa5.52□□□□□ -1.53
VPS13A-211ENST00000484581 B4GALT4O60513 344 aa5.52□□□□□ -1.53
VPS13A-211ENST00000484581 SEC24DO94855 1032 aaPredicted RBP5.52□□□□□ -1.53
VPS13A-211ENST00000484581 LRG1P02750 347 aa5.52□□□□□ -1.53
VPS13A-211ENST00000484581 TACR2P21452 398 aa5.52□□□□□ -1.53
VPS13A-211ENST00000484581 XPAP23025 273 aaPredicted RBP5.52□□□□□ -1.53
VPS13A-211ENST00000484581 APEX1P27695 318 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms